Human Gene RPL21P44 (ENST00000491826.2_2) from GENCODE V47lift37
  Description: ribosomal protein L21 pseudogene 44 (from RefSeq NR_027153.1)
Gencode Transcript: ENST00000491826.2_2
Gencode Gene: ENSG00000229585.4_7
Transcript (Including UTRs)
   Position: hg19 chr4:54,852,754-54,853,225 Size: 472 Total Exon Count: 1 Strand: -


Page IndexSequence and LinksPrimersRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr4:54,852,754-54,853,225)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
EnsemblEntrez GeneExonPrimerHGNCPubMedBioGrid CRISPR DB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.05 RPKM in Brain - Cerebellar Hemisphere
Total median expression: 9.91 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC057822 - Homo sapiens ribosomal protein L21 pseudogene 44, mRNA (cDNA clone IMAGE:5287560).
CU691260 - Synthetic construct Homo sapiens gateway clone IMAGE:100021011 5' read LOC402176 mRNA.
HQ448544 - Synthetic construct Homo sapiens clone IMAGE:100071980; CCSB010914_03 similar to 60S ribosomal protein L21 (LOC402176) gene, encodes complete protein.
KJ900987 - Synthetic construct Homo sapiens clone ccsbBroadEn_10381 RPL21P44 gene, encodes complete protein.
DQ594786 - Homo sapiens piRNA piR-60898, complete sequence.
LF371039 - JP 2014500723-A/178542: Polycomb-Associated Non-Coding RNAs.
LF324899 - JP 2014500723-A/132402: Polycomb-Associated Non-Coding RNAs.
LF332458 - JP 2014500723-A/139961: Polycomb-Associated Non-Coding RNAs.
MA606616 - JP 2018138019-A/178542: Polycomb-Associated Non-Coding RNAs.
MA560476 - JP 2018138019-A/132402: Polycomb-Associated Non-Coding RNAs.
MA568035 - JP 2018138019-A/139961: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000491826.1, NR_027153, uc322muf.1
UCSC ID: ENST00000491826.2_2
RefSeq Accession: NR_027153.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.