Human Gene SGK1 (ENST00000367858.10_11) from GENCODE V47lift37
  Description: serum/glucocorticoid regulated kinase 1, transcript variant 2 (from RefSeq NM_001143676.3)
Gencode Transcript: ENST00000367858.10_11
Gencode Gene: ENSG00000118515.12_17
Transcript (Including UTRs)
   Position: hg19 chr6:134,490,394-134,639,250 Size: 148,857 Total Exon Count: 14 Strand: -
Coding Region
   Position: hg19 chr6:134,491,406-134,638,598 Size: 147,193 Coding Exon Count: 14 

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Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr6:134,490,394-134,639,250)mRNA (may differ from genome)Protein (526 aa)
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-  Comments and Description Text from UniProtKB
  ID: SGK1_HUMAN
DESCRIPTION: RecName: Full=Serine/threonine-protein kinase Sgk1; EC=2.7.11.1; AltName: Full=Serum/glucocorticoid-regulated kinase 1;
FUNCTION: Serine/threonine-protein kinase which is involved in the regulation of a wide variety of ion channels, membrane transporters, cellular enzymes, transcription factors, neuronal excitability, cell growth, proliferation, survival, migration and apoptosis. Plays an important role in cellular stress response. Contributes to regulation of renal Na(+) retention, renal K(+) elimination, salt appetite, gastric acid secretion, intestinal Na(+)/H(+) exchange and nutrient transport, insulin-dependent salt sensitivity of blood pressure, salt sensitivity of peripheral glucose uptake, cardiac repolarization and memory consolidation. Up-regulates Na(+) channels: SCNN1A/ENAC, SCN5A and ASIC1/ACCN2, K(+) channels: KCNJ1/ROMK1, KCNA1-5, KCNQ1-5 and KCNE1, epithelial Ca(2+) channels: TRPV5 and TRPV6, chloride channels: BSND, CLCN2 and CFTR, glutamate transporters: SLC1A3/EAAT1, SLC1A2 /EAAT2, SLC1A1/EAAT3, SLC1A6/EAAT4 and SLC1A7/EAAT5, amino acid transporters: SLC1A5/ASCT2, SLC38A1/SN1 and SLC6A19, creatine transporter: SLC6A8, Na(+)/dicarboxylate cotransporter: SLC13A2/NADC1, Na(+)-dependent phosphate cotransporter: SLC34A2/NAPI-2B, glutamate receptor: GRIK2/GLUR6. Up-regulates carriers: SLC9A3/NHE3, SLC12A1/NKCC2, SLC12A3/NCC, SLC5A3/SMIT, SLC2A1/GLUT1, SLC5A1/SGLT1 and SLC15A2/PEPT2. Regulates enzymes: GSK3A/B, PMM2 and Na(+)/K(+) ATPase, and transcription factors: CTNNB1 and nuclear factor NF-kappa-B. Stimulates sodium transport into epithelial cells by enhancing the stability and expression of SCNN1A/ENAC. This is achieved by phosphorylating the NEDD4L ubiquitin E3 ligase, promoting its interaction with 14-3-3 proteins, thereby preventing it from binding to SCNN1A/ENAC and targeting it for degradation. Regulates store-operated Ca(+2) entry (SOCE) by stimulating ORAI1 and STIM1. Regulates KCNJ1/ROMK1 directly via its phosphorylation or indirectly via increased interaction with SLC9A3R2/NHERF2. Phosphorylates MDM2 and activates MDM2-dependent ubiquitination of p53/TP53. Phosphorylates MAPT/TAU and mediates microtubule depolymerization and neurite formation in hippocampal neurons. Phosphorylates SLC2A4/GLUT4 and up-regulates its activity. Phosphorylates APBB1/FE65 and promotes its localization to the nucleus. Phosphorylates MAPK1/ERK2 and activates it by enhancing its interaction with MAP2K1/MEK1 and MAP2K2/MEK2. Phosphorylates FBXW7 and plays an inhibitory role in the NOTCH1 signaling. Phosphorylates FOXO1 resulting in its relocalization from the nucleus to the cytoplasm. Phosphorylates FOXO3, promoting its exit from the nucleus and interference with FOXO3-dependent transcription. Phosphorylates BRAF and MAP3K3/MEKK3 and inhibits their activity. Phosphorylates SLC9A3/NHE3 in response to dexamethasone, resulting in its activation and increased localization at the cell membrane. Phosphorylates CREB1. Necessary for vascular remodeling during angiogenesis. Sustained high levels and activity may contribute to conditions such as hypertension and diabetic nephropathy. Isoform 2 exhibited a greater effect on cell plasma membrane expression of SCNN1A/ENAC and Na(+) transport than isoform 1.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
ENZYME REGULATION: Two specific sites, one in the kinase domain (Thr-256) and the other in the C-terminal regulatory region (Ser- 422), need to be phosphorylated for its full activation. Phosphorylation at Ser-397 and Ser-401 are also essential for its activity. Activated by WNK1, WNK2, WNK3 and WNK4.
SUBUNIT: Homodimer; disulfide-linked. Forms a trimeric complex with FBXW7 and NOTCH1. Interacts with MAPK3/ERK1, MAPK1/ERK2, MAP2K1/MEK1, MAP2K2/MEK2, NEDD4, NEDD4L, MAPT/TAU, MAPK7, CREB1, SLC9A3R2/NHERF2 and KCNJ1/ROMK1. Associates with the mammalian target of rapamycin complex 2 (mTORC2) via an interaction with MAPKAP1/SIN1.
SUBCELLULAR LOCATION: Cytoplasm. Nucleus. Endoplasmic reticulum membrane. Cell membrane. Mitochondrion. Note=The subcellular localization is controlled by the cell cycle, as well as by exposure to specific hormones and environmental stress stimuli. In proliferating cells, it shuttles between the nucleus and cytoplasm in synchrony with the cell cycle, and in serum/growth factor- stimulated cells it resides in the nucleus. In contrast, after exposure to environmental stress or treatment with glucocorticoids, it is detected in the cytoplasm and with certain stress conditions is associated with the mitochondria. In osmoregulation through the epithelial sodium channel, it can be localized to the cytoplasmic surface of the cell membrane. Nuclear, upon phosphorylation.
SUBCELLULAR LOCATION: Isoform 2: Cell membrane.
TISSUE SPECIFICITY: Expressed in most tissues with highest levels in the pancreas, followed by placenta, kidney and lung. Isoform 2 is strongly expressed in brain and pancreas, weaker in heart, placenta, lung, liver and skeletal muscle.
INDUCTION: Induced by a very large spectrum of stimuli distinct from glucocorticoids and serum. These include aldosterone, cell shrinkage, cell swelling, TGF-beta, ischemic injury of the brain, neuronal excitotoxicity memory consolidation, chronic viral hepatitis, DNA-damaging agents, vitamin D3 psychophysiological stress, iron, glucose, EDN1, CSF2, fibroblast growth factor, platelet-derived growth factor, phorbolesters, follicle- stimulating hormone, sorbitol, heat shock, oxidative stress, UV irradiation, and p53/TP53. Many of these stimuli are highly cell- specific, as is the case, for example for aldosterone, which has been found to stimulate its expression only in cells derived from aldosterone-responsive epithelia. Isoform 2 is not induced by glucocorticoids but by excessive extracellular glucose and by TGFB1, in cultured cells.
DOMAIN: Isoform 2 subcellular localization at the cell membrane and resistance to proteasomal degradation is mediated by the sequences within the first 120 amino acids.
PTM: Regulated by phosphorylation. Activated by phosphorylation on Ser-422 by mTORC2, transforming it into a substrate for PDPK1 which phosphorylates it on Thr-256. Phosphorylation on Ser-397 and Ser-401 are also essential for its activity. Phosphorylation on Ser-78 by MAPK7 is required for growth factor-induced cell cycle progression.
PTM: Ubiquitinated by NEDD4L; which promotes proteasomal degradation. Ubiquitinated by SYVN1 at the endoplasmic reticulum; which promotes rapid proteasomal degradation and maintains a high turnover rate in resting cells. Isoform 2 shows enhanced stability.
SIMILARITY: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
SIMILARITY: Contains 1 AGC-kinase C-terminal domain.
SIMILARITY: Contains 1 protein kinase domain.

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: SGK1
Diseases sorted by gene-association score: pseudohypoaldosteronism, type i (8), nodular lymphocyte predominant hodgkin lymphoma (7), liddle syndrome (7), pseudohypoaldosteronism type i, autosomal dominant (6), long qt syndrome 6 (4), long qt syndrome 5 (4), cystic fibrosis (2)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 57.64 RPKM in Small Intestine - Terminal Ileum
Total median expression: 760.26 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -233.60652-0.358 Picture PostScript Text
3' UTR -277.501012-0.274 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000961 - AGC-kinase_C
IPR011009 - Kinase-like_dom
IPR017892 - Pkinase_C
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF00433 - Protein kinase C terminal domain
PF07714 - Protein tyrosine and serine/threonine kinase
PF14531 - Kinase-like

SCOP Domains:
56112 - Protein kinase-like (PK-like)
64268 - PX domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2R5T - X-ray MuPIT 3HDM - X-ray MuPIT 3HDN - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on O00141
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologGenome BrowserNo ortholog
Gene DetailsGene Details  Gene Details 
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    Protein Sequence 
    Alignment 

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004712 protein serine/threonine/tyrosine kinase activity
GO:0005246 calcium channel regulator activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0015459 potassium channel regulator activity
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0017080 sodium channel regulator activity
GO:0017081 chloride channel regulator activity

Biological Process:
GO:0001558 regulation of cell growth
GO:0006468 protein phosphorylation
GO:0006814 sodium ion transport
GO:0006915 apoptotic process
GO:0006974 cellular response to DNA damage stimulus
GO:0007616 long-term memory
GO:0008217 regulation of blood pressure
GO:0016310 phosphorylation
GO:0018105 peptidyl-serine phosphorylation
GO:0030334 regulation of cell migration
GO:0032411 positive regulation of transporter activity
GO:0034220 ion transmembrane transport
GO:0035556 intracellular signal transduction
GO:0042127 regulation of cell proliferation
GO:0042981 regulation of apoptotic process
GO:0048812 neuron projection morphogenesis
GO:0050790 regulation of catalytic activity
GO:0051090 regulation of sequence-specific DNA binding transcription factor activity
GO:0060453 regulation of gastric acid secretion
GO:0070294 renal sodium ion absorption

Cellular Component:
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016607 nuclear speck


-  Descriptions from all associated GenBank mRNAs
  FM205709 - Homo sapiens mRNA for serum/glucocorticoid regulated kinase 1 variant D (SGK1 gene).
AK055077 - Homo sapiens cDNA FLJ30515 fis, clone BRAWH2000686, highly similar to Serine/threonine-protein kinase Sgk1 (EC 2.7.11.1).
EU518415 - Homo sapiens serum/glucocorticoid regulated kinase 1 isoform 2 (SGK1) mRNA, complete cds.
BX537882 - Homo sapiens mRNA; cDNA DKFZp686H1615 (from clone DKFZp686H1615).
BX649005 - Homo sapiens mRNA; cDNA DKFZp686M0890 (from clone DKFZp686M0890).
BC013832 - Homo sapiens serum/glucocorticoid regulated kinase 1, mRNA (cDNA clone IMAGE:4149746).
AF153609 - Homo sapiens serine/threonine protein kinase sgk mRNA, complete cds.
BC001263 - Homo sapiens serum/glucocorticoid regulated kinase 1, mRNA (cDNA clone MGC:5030 IMAGE:3459056), complete cds.
FM205707 - Homo sapiens mRNA for serum/glucocorticoid regulated kinase 1 variant B (SGK1 gene).
Y10032 - H.sapiens mRNA for putative serine/threonine protein kinase.
AK098509 - Homo sapiens cDNA FLJ25643 fis, clone STM07148, highly similar to SERINE/THREONINE-PROTEIN KINASE SGK (EC 2.7.1.-).
JD047964 - Sequence 28988 from Patent EP1572962.
JD509216 - Sequence 490240 from Patent EP1572962.
FM205710 - Homo sapiens mRNA for serum/glucocorticoid regulated kinase 1 variant F (SGK1 gene).
JD433250 - Sequence 414274 from Patent EP1572962.
FM205708 - Homo sapiens mRNA for serum/glucocorticoid regulated kinase 1 variant C (SGK1 gene).
JD527791 - Sequence 508815 from Patent EP1572962.
JD078787 - Sequence 59811 from Patent EP1572962.
JD551614 - Sequence 532638 from Patent EP1572962.
JD521345 - Sequence 502369 from Patent EP1572962.
AK298688 - Homo sapiens cDNA FLJ58680 complete cds, highly similar to Serine/threonine-protein kinase Sgk1 (EC 2.7.11.1).
JD437250 - Sequence 418274 from Patent EP1572962.
AK295422 - Homo sapiens cDNA FLJ55062 complete cds, highly similar to Serine/threonine-protein kinase Sgk1 (EC 2.7.11.1).
AK293383 - Homo sapiens cDNA FLJ52914 complete cds, highly similar to Serine/threonine-protein kinase Sgk1 (EC 2.7.11.1).
JD565869 - Sequence 546893 from Patent EP1572962.
KJ892133 - Synthetic construct Homo sapiens clone ccsbBroadEn_01527 SGK1 gene, encodes complete protein.
KJ905315 - Synthetic construct Homo sapiens clone ccsbBroadEn_14840 SGK1 gene, encodes complete protein.
CU674630 - Synthetic construct Homo sapiens gateway clone IMAGE:100017254 5' read SGK mRNA.
JQ836654 - Homo sapiens Sgk1 variant i3 (SGK1) mRNA, partial cds.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein O00141 (Reactome details) participates in the following event(s):

R-HSA-6795290 TORC2 complex phosphorylates SGK1
R-HSA-6795473 PDPK1 phosphorylates SGK1
R-HSA-6795460 SGK1 phosphorylates MDM2
R-HSA-2682349 RAF1:SGK:TSC22D3:WPP ubiquitinates SCNN channels
R-HSA-6804757 Regulation of TP53 Degradation
R-HSA-6806003 Regulation of TP53 Expression and Degradation
R-HSA-5633007 Regulation of TP53 Activity
R-HSA-2672351 Stimuli-sensing channels
R-HSA-3700989 Transcriptional Regulation by TP53
R-HSA-983712 Ion channel transport
R-HSA-212436 Generic Transcription Pathway
R-HSA-382551 Transport of small molecules
R-HSA-73857 RNA Polymerase II Transcription
R-HSA-74160 Gene expression (Transcription)

-  Other Names for This Gene
  Alternate Gene Symbols: B7UUP7, B7UUP8, B7UUP9, B7Z5B2, E1P583, ENST00000367858.1, ENST00000367858.2, ENST00000367858.3, ENST00000367858.4, ENST00000367858.5, ENST00000367858.6, ENST00000367858.7, ENST00000367858.8, ENST00000367858.9, NM_001143676, O00141, Q5TCN2, Q5TCN3, Q5TCN4, Q5VY65, Q9UN56, SGK, SGK1_HUMAN, uc318ggl.1, uc318ggl.2
UCSC ID: ENST00000367858.10_11
RefSeq Accession: NM_001143676.3
Protein: O00141 (aka SGK1_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.