Human Gene TSPAN14 (ENST00000265450.5_1) from GENCODE V47lift37
  Description: tetraspanin 14 (from HGNC TSPAN14)
Gencode Transcript: ENST00000265450.5_1
Gencode Gene: ENSG00000108219.17_9
Transcript (Including UTRs)
   Position: hg19 chr10:82,275,223-82,279,391 Size: 4,169 Total Exon Count: 2 Strand: +


Page IndexSequence and LinksPrimersCTDRNA-Seq ExpressionMicroarray Expression
Other SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:82,275,223-82,279,391)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSEnsemblExonPrimerHGNCPubMedWikipedia

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 13.55 RPKM in Adipose - Subcutaneous
Total median expression: 300.22 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  LF210016 - JP 2014500723-A/17519: Polycomb-Associated Non-Coding RNAs.
BC093016 - Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:110883 IMAGE:30528940), complete cds.
AK295321 - Homo sapiens cDNA FLJ54931 complete cds, highly similar to Tetraspanin-14.
AL136638 - Homo sapiens mRNA; cDNA DKFZp564B1037 (from clone DKFZp564B1037).
AF311903 - Homo sapiens DC-TM4F2 precursor, mRNA, complete cds.
BC002920 - Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:11352 IMAGE:3954042), complete cds.
KJ903332 - Synthetic construct Homo sapiens clone ccsbBroadEn_12726 TSPAN14 gene, encodes complete protein.
AK055330 - Homo sapiens cDNA FLJ30768 fis, clone FEBRA2000727.
LF334037 - JP 2014500723-A/141540: Polycomb-Associated Non-Coding RNAs.
JD290997 - Sequence 272021 from Patent EP1572962.
JD471882 - Sequence 452906 from Patent EP1572962.
JD382514 - Sequence 363538 from Patent EP1572962.
JD086761 - Sequence 67785 from Patent EP1572962.
JD528319 - Sequence 509343 from Patent EP1572962.
JD198930 - Sequence 179954 from Patent EP1572962.
JD080089 - Sequence 61113 from Patent EP1572962.
JD103762 - Sequence 84786 from Patent EP1572962.
JD445775 - Sequence 426799 from Patent EP1572962.
JD329381 - Sequence 310405 from Patent EP1572962.
JD439629 - Sequence 420653 from Patent EP1572962.
JD052512 - Sequence 33536 from Patent EP1572962.
JD377070 - Sequence 358094 from Patent EP1572962.
JD269868 - Sequence 250892 from Patent EP1572962.
JD453921 - Sequence 434945 from Patent EP1572962.
JD375423 - Sequence 356447 from Patent EP1572962.
JD214989 - Sequence 196013 from Patent EP1572962.
JD562394 - Sequence 543418 from Patent EP1572962.
JD341182 - Sequence 322206 from Patent EP1572962.
JD448013 - Sequence 429037 from Patent EP1572962.
JD086391 - Sequence 67415 from Patent EP1572962.
LF334036 - JP 2014500723-A/141539: Polycomb-Associated Non-Coding RNAs.
JD493235 - Sequence 474259 from Patent EP1572962.
JD308655 - Sequence 289679 from Patent EP1572962.
JD549920 - Sequence 530944 from Patent EP1572962.
JD412648 - Sequence 393672 from Patent EP1572962.
JD114137 - Sequence 95161 from Patent EP1572962.
JD164027 - Sequence 145051 from Patent EP1572962.
LF334035 - JP 2014500723-A/141538: Polycomb-Associated Non-Coding RNAs.
JD232454 - Sequence 213478 from Patent EP1572962.
AK025157 - Homo sapiens cDNA: FLJ21504 fis, clone COL05662.
JD317552 - Sequence 298576 from Patent EP1572962.
LF334034 - JP 2014500723-A/141537: Polycomb-Associated Non-Coding RNAs.
JD105206 - Sequence 86230 from Patent EP1572962.
JD070746 - Sequence 51770 from Patent EP1572962.
JD259954 - Sequence 240978 from Patent EP1572962.
JD126969 - Sequence 107993 from Patent EP1572962.
JD253067 - Sequence 234091 from Patent EP1572962.
JD389053 - Sequence 370077 from Patent EP1572962.
JD309123 - Sequence 290147 from Patent EP1572962.
JD478947 - Sequence 459971 from Patent EP1572962.
JD543806 - Sequence 524830 from Patent EP1572962.
JD388769 - Sequence 369793 from Patent EP1572962.
LF334033 - JP 2014500723-A/141536: Polycomb-Associated Non-Coding RNAs.
JD247650 - Sequence 228674 from Patent EP1572962.
LF334032 - JP 2014500723-A/141535: Polycomb-Associated Non-Coding RNAs.
JD524962 - Sequence 505986 from Patent EP1572962.
JD207264 - Sequence 188288 from Patent EP1572962.
JD449653 - Sequence 430677 from Patent EP1572962.
LF334031 - JP 2014500723-A/141534: Polycomb-Associated Non-Coding RNAs.
MA445593 - JP 2018138019-A/17519: Polycomb-Associated Non-Coding RNAs.
MA569614 - JP 2018138019-A/141540: Polycomb-Associated Non-Coding RNAs.
MA569613 - JP 2018138019-A/141539: Polycomb-Associated Non-Coding RNAs.
MA569612 - JP 2018138019-A/141538: Polycomb-Associated Non-Coding RNAs.
MA569611 - JP 2018138019-A/141537: Polycomb-Associated Non-Coding RNAs.
MA569610 - JP 2018138019-A/141536: Polycomb-Associated Non-Coding RNAs.
MA569609 - JP 2018138019-A/141535: Polycomb-Associated Non-Coding RNAs.
MA569608 - JP 2018138019-A/141534: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: AK055330, ENST00000265450.1, ENST00000265450.2, ENST00000265450.3, ENST00000265450.4, uc317ibp.1
UCSC ID: ENST00000265450.5_1
RefSeq Accession: NM_001128309.3

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.