Human Gene ZNF266 (ENST00000592904.7_10) from GENCODE V47lift37
  Description: zinc finger protein 266, transcript variant 14 (from RefSeq NM_001370385.1)
Gencode Transcript: ENST00000592904.7_10
Gencode Gene: ENSG00000174652.20_12
Transcript (Including UTRs)
   Position: hg19 chr19:9,523,105-9,546,249 Size: 23,145 Total Exon Count: 11 Strand: -
Coding Region
   Position: hg19 chr19:9,523,951-9,530,765 Size: 6,815 Coding Exon Count: 6 

Page IndexSequence and LinksPrimersCTDGene AllelesRNA-Seq Expression
Microarray ExpressionRNA StructureOther SpeciesmRNA DescriptionsOther NamesModel Information
Methods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:9,523,105-9,546,249)mRNA (may differ from genome)Protein (616 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMGIOMIMPubMedUniProtKBWikipedia
BioGrid CRISPR DB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 23.92 RPKM in Spleen
Total median expression: 493.52 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -299.80847-0.354 Picture PostScript Text
3' UTR -223.50846-0.264 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGD    
      
      

-  Descriptions from all associated GenBank mRNAs
  AK027480 - Homo sapiens cDNA FLJ14574 fis, clone NT2RM4000751.
JD506397 - Sequence 487421 from Patent EP1572962.
JD250397 - Sequence 231421 from Patent EP1572962.
BC017407 - Homo sapiens zinc finger protein 266, mRNA (cDNA clone IMAGE:4306854), partial cds.
BC071628 - Homo sapiens zinc finger protein 266, mRNA (cDNA clone IMAGE:5492311), partial cds.
AL833471 - Homo sapiens mRNA; cDNA DKFZp686K1717 (from clone DKFZp686K1717).
AL833503 - Homo sapiens mRNA; cDNA DKFZp686B0937 (from clone DKFZp686B0937).
BC112919 - Homo sapiens zinc finger protein 266, mRNA (cDNA clone MGC:131495 IMAGE:7502631), complete cds.
AB095928 - Homo sapiens mRNA for KIAA2007 protein.
AY376240 - Homo sapiens KIAA2007 protein isoform mRNA, complete cds.
JD041854 - Sequence 22878 from Patent EP1572962.
JD516502 - Sequence 497526 from Patent EP1572962.
BC126255 - Homo sapiens zinc finger protein 266, mRNA (cDNA clone MGC:161533 IMAGE:8991971), complete cds.
BC143940 - Homo sapiens cDNA clone IMAGE:9052458.
BC146837 - Homo sapiens zinc finger protein 266, mRNA (cDNA clone MGC:181939 IMAGE:9056764), complete cds.
JD332945 - Sequence 313969 from Patent EP1572962.
JD258205 - Sequence 239229 from Patent EP1572962.
JD204468 - Sequence 185492 from Patent EP1572962.
JD366843 - Sequence 347867 from Patent EP1572962.
JD316089 - Sequence 297113 from Patent EP1572962.
X78924 - H.sapiens HZF1 mRNA for zinc finger protein.
KJ906058 - Synthetic construct Homo sapiens clone ccsbBroadEn_15728 ZNF266 gene, encodes complete protein.
HQ258451 - Synthetic construct Homo sapiens clone IMAGE:100072880 zinc finger protein 266 (ZNF266) (ZNF266) gene, encodes complete protein.
KJ898284 - Synthetic construct Homo sapiens clone ccsbBroadEn_07678 ZNF266 gene, encodes complete protein.
AB527242 - Synthetic construct DNA, clone: pF1KB9772, Homo sapiens ZNF266 gene for zinc finger protein 266, without stop codon, in Flexi system.
JD206284 - Sequence 187308 from Patent EP1572962.
JD316290 - Sequence 297314 from Patent EP1572962.
JD354463 - Sequence 335487 from Patent EP1572962.
JD307279 - Sequence 288303 from Patent EP1572962.
JD373964 - Sequence 354988 from Patent EP1572962.
JD228393 - Sequence 209417 from Patent EP1572962.
JD453949 - Sequence 434973 from Patent EP1572962.
LN607832 - Homo sapiens partial mRNA for zinc finger protein 266 (ZNF266 gene).

-  Other Names for This Gene
  Alternate Gene Symbols: A0A3F2YPB8, A0A3F2YPB8_HUMAN, ENST00000592904.1, ENST00000592904.2, ENST00000592904.3, ENST00000592904.4, ENST00000592904.5, ENST00000592904.6, NM_001370385, uc326yfb.1, uc326yfb.2, ZNF266
UCSC ID: ENST00000592904.7_10
RefSeq Accession: NM_001370374.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.