Schema for ensPep
  Database: ci3    Primary Table: ensPep    Row Count: 17,302   Data last updated: 2021-05-25
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSCINT00000000006.3varchar(255) values Name of gene - same as in genePred
seq MELKKFDPSEFPSNYHDYKLLGKGGFG...longblob   Peptide sequence

Connected Tables and Joining Fields
        ci3.ensGene.name (via ensPep.name)
      ci3.ensGtp.transcript (via ensPep.name)
      ci3.ensemblSource.name (via ensPep.name)
      ci3.ensemblToGeneName.name (via ensPep.name)
      knownGeneV39.knownToEnsembl.value (via ensPep.name)

Sample Rows
 
nameseq
ENSCINT00000000006.3MELKKFDPSEFPSNYHDYKLLGKGGFGEVRACYHASLGRVALKLFRITGGRKDIKRAKRGLEKEAKILQRMKHPHIVTFYGVTSLFEKECLVMEFMEGGNLNELLMSKIVLSWTSRLRLLHELISAIS ...
ENSCINT00000000015.3DVIFHDMHELVNHVTRDHVGGMDQTDHTCYWEDCSRKRKGFKAKYKLVNHIRVHTGEKPFVCPFPDCGKTFGRSENLKIHHRTHTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYACKYEGCD ...
ENSCINT00000000017.3MYSNVMVDRPYAAYDPRASLTAHASFLQGHQQPIDSKSYSMANHPSASYYPGYGMIPHFAQSLESHLQGMHNFNSRENFHPVQYPTHSTLTNPIACKWRNVKNGGRSCDVIFHDMHELVNHVTRDHVG ...
ENSCINT00000000018.3MRNNQAEMDRGSSSAKKRRRNYDESYLKFGFTYVEKDGCQHPKCVICLKVLSVESMLPSKLKRHLMSTHSSLSDKPREFFARKLAGFQRQAASISTAFTIPSKVQLASFKVAYRIARAKKPHTIAENL ...
ENSCINT00000000019.3IYYKYTSESGILYNHKISIIILASTIESVIMDDLMSVMRNNQAEMDRGSSSAKKRRRNYDESYLKFGFTYVEKDGCQHPKCVICLKVLSVESMLPSKLKRHLMSTHSSLSDKPREFFARKLAGFQRQA ...
ENSCINT00000000022.3MSSFPSNRVVVLVDMDCFYVQVEQRRDSSLKGKPCAVVQYNQWKGGGIIAVSYEARDEGVTRNMRGDDAKAKCPEIILCKVPMANGKADLTRYRDAGAEVIQVLLQFGGVVERASVDEAYIDLTSVVD ...
ENSCINT00000000023.3HLLGGIRRSSEVTTFKQAPSKFSVVGGKFVRVESKDKQDQVTHTGQFFEQDDWRRNRFIDRKKLVNPNWGINLVAEIPPIEVEGRIAVCDGRE
ENSCINT00000000024.3MCLDRLSVMSWKTPCGRINGNSLVRAYNTFSRIVKSILSRSLYALYSFIAVWRVTEALNETIYWLLLFTLCPLALETVHSVLIRKGNEMKWMTPSVLFYLLCGIPCIWLLEVKLLSDRLTNLSPTNTS ...
ENSCINT00000000026.3MNSPYNNAPPPAPHNSSSLSTLGKGRGTRKKRKPQDNSGGSANKKSKLEVPYNQRLPVHGFPLEHPFNKDGYRYILAEPDPHILDNDPDPDCPGKPIPGKLYRQWLHKNVLLSLHDRAPQLKVSDDRL ...
ENSCINT00000000033.3MSLVIFAWMLVMQIAVCSALTLPEFTHLAALSTQSNSPFRILGIAGLNTYTISISGFPRHPTGEMPGQCIHPRILTIPKSPVAASDEVSYCAPQGIVGVTIGGTAIYNHLEADCVDVNSMPSGSFDLC ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.