Schema for ensPep
  Database: danRer7    Primary Table: ensPep    Row Count: 43,153   Data last updated: 2014-03-04
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSDART00000000004varchar(255) values Name of gene - same as in genePred
seq MSFTMARYSSSSSSASSSSCGCCRPCS...longblob   Peptide sequence

Connected Tables and Joining Fields
        danRer7.ensGene.name (via ensPep.name)
      danRer7.ensGtp.transcript (via ensPep.name)
      danRer7.ensemblSource.name (via ensPep.name)
      danRer7.ensemblToGeneName.name (via ensPep.name)
      knownGeneV39.knownToEnsembl.value (via ensPep.name)

Sample Rows
 
nameseq
ENSDART00000000004MSFTMARYSSSSSSASSSSCGCCRPCSRICSRSSAYTLALGLGFVTLGTSRILLLKFSGNEENKYDYLPASVNLMAEAIKLVFCLVMSVRVIIREGRSFKDLGCSSGASFLSYLKWSVPAFLYFLDNL ...
ENSDART00000000005MRARYMLGFGVLCLLTWAVYVSESSPTDKQAKLRLMSVRRARQNKSRQGQIIKTRASSTWINDKRQQMQGDEGVQFRRNVQSRKVLAQRRPAQGGTRNPIQQDDGTPGARARVSRMPSSAGSPNLLAS ...
ENSDART00000000019MEDHTVHQTEHMTTIEAHAVSQQVGQVHVATYTEHGMLSADEDSPSSPDDDAYDDSDILNSTGTDEVTAHLAAAGPVGMAAAAAVATGKKRKRPHIFESNPSIRKRQQTRLLRKLRATLDEYTTRVGQ ...
ENSDART00000000042MEPGVEAAGVHVRDELSEKCQKLFLEFLEEFQDKNGDALYLSDAQELIRPERNTLTVSFSNIEHYNQQLATTIQEEYYRVYPFLCRAVRHFARDHGNIPPSKEFYVAFSEFPSRQKIRELSTVRIGTL ...
ENSDART00000000069MSSDLRPKLCVLEKGDTGYGFHLHGEKNKPGQFIRHVEPDSPAAAAGLLAGDKLALVNGENVEDEKHQQVVSRIRDTVGKLELVVLNAETAELLLKHNLKCQKEYVTDGIPIPAGSEPEDEVKNGTSS ...
ENSDART00000000070MSSPPKEKTETRAGHLPAVKAGGMRIVQKHQSPIEVPDKKDDKDSTEYETVIPPKLPVVVSGVVTKGDKDFTPAAAQVAHQKPVPSAQKLPAGQHLNQHIHQPRK
ENSDART00000000087MAQFPTPFGGGSDTWVISVDERAKHDQQFHSLTPTPAGFITGDQARNFFLQSGLPAPILAQIWALADMNNDGKMDMHEFSIAMKLIKLKLQGHPLPPSLPPSMKQQPISIPPPTPFGIPSMGAMPGLP ...
ENSDART00000000102MKVPKNTPLVVFLAFFSLTEGLQRAPRITTLLETVDSSLDHNATFICEVDSYPQADIIWTRNNYPIRYYDSRYVIQENGQMLIIPNVKDSDSGEYCCIANNGVGEAKSCGALQLKMKPQIKRHPTNMT ...
ENSDART00000000160MENTEQEHNLPEGDETQWPNGVKRKRKNSQCSMNSTSDKSISVPGYVPSYLEKDEPCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDSCCIIDKITRNQCQLCRFRKCISVGMAMDL ...
ENSDART00000000192MTARFRLPAGRSYDVGALEEARERQHAQVECNVLLLDNTVQTFRVNKQDQGQILLDVVYKHLELTERDYFGLQLADDTSDTQRWLDPNKPVRKQLKRPSPHNLRFRVKFFVGDPGKLQEEYTRYLYFL ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.