Schema for wgEncodeGencodeTranscriptSupportV47lift37
  Database: hg19    Primary Table: wgEncodeGencodeTranscriptSupportV47lift37    Row Count: 16,581   Data last updated: 2024-10-17
Format description: GENCODE transcript support from other datasets
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000423372.3varchar(255) values GENCODE transcript identifier
seqId A8E4K2varchar(255) values Identifier of sequence supporting transcript
seqSrc Uniprot/SPTREMBLvarchar(255) values Source of supporting sequence

Connected Tables and Joining Fields
        hg19.wgEncodeGencodeAttrsV47lift37.transcriptId (via wgEncodeGencodeTranscriptSupportV47lift37.transcriptId)

Sample Rows
 
transcriptIdseqIdseqSrc
ENST00000423372.3A8E4K2Uniprot/SPTREMBL
ENST00000423372.3BC092421.1EMBL
ENST00000426406.1BC137547.1EMBL
ENST00000426406.1CCDS41220.1CCDS
ENST00000540477.1Q8N5W6Uniprot/SPTREMBL
ENST00000432963.1_4AA978124.1EMBL
ENST00000432963.1_4P0C7U8Uniprot/SPTREMBL
ENST00000379317.1_4AK128833.1EMBL
ENST00000379288.3_1CCDS8.1CCDS
ENST00000379288.3_1NM_153254.2RefSeq_dna

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.