Schema for wgEncodeGencodeGeneSourceV32

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Schema for wgEncodeGencodeGeneSourceV32

Database: hg38 Primary Table: wgEncodeGencodeGeneSourceV32 Row Count: 67,008 Data last updated: 2019-09-26
Format description: The source of Gencode gene annotation
On download server: MariaDB table dump directory

field	example	SQL type	info	description
`geneId`	ENSG00000223972.5	`varchar(255)`	values	GENCODE gene identifier
`source`	havana	`varchar(255)`	values	Source of gene

Connected Tables and Joining Fields


	hg38.wgEncodeGencodeAttrsV32.geneId (via wgEncodeGencodeGeneSourceV32.geneId)

Sample Rows

geneId	source
ENSG00000223972.5	havana
ENSG00000227232.5	havana
ENSG00000278267.1	ncrna
ENSG00000243485.5	havana
ENSG00000284332.1	ncrna
ENSG00000237613.2	havana
ENSG00000268020.3	havana
ENSG00000240361.2	havana
ENSG00000186092.6	ensembl_havana_gene
ENSG00000238009.6	ensembl_havana_lincrna

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.