Schema for wgEncodeGencodePdbV28
  Database: hg38    Primary Table: wgEncodeGencodePdbV28    Row Count: 133,438   Data last updated: 2018-04-11
Format description: GENCODE transcript to Protein Data Bank (PDB) protein structure mapping
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000379389.4varchar(255) values GENCODE transcript identifier
pdbId 1Z2Mvarchar(255) values Protein Data Bank (PDB) identifier

Connected Tables and Joining Fields
        hg38.wgEncodeGencodeAttrsV28.transcriptId (via wgEncodeGencodePdbV28.transcriptId)

Sample Rows
 
transcriptIdpdbId
ENST00000379389.41Z2M
ENST00000379389.42HJ8
ENST00000379389.43PHX
ENST00000379389.43PSE
ENST00000379389.43R66
ENST00000379389.43RT3
ENST00000379389.43SDL
ENST00000379389.45TL6
ENST00000379389.45W8T
ENST00000379389.45W8U

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.