Schema for wgEncodeGencodeExonSupportVM28
  Database: mm39    Primary Table: wgEncodeGencodeExonSupportVM28    Row Count: 7,096,948   Data last updated: 2022-01-16
Format description: GENCODE exon support from other datasets
On download server: MariaDB table dump directory
fieldexampleSQL type description
transcriptId ENSMUST00000193812.2varchar(255) GENCODE transcript identifier
seqId AK016604.1varchar(255) Identifier of sequence supporting transcript
seqSrc EMBLvarchar(255) Source of supporting sequence
exonId ENSMUSE00001343744.2varchar(255) GENCODE exon identifier (not stable)
chrom chr1varchar(255) Chromosome
chromStart 3143475int(10) unsigned Start position in chromosome
chromEnd 3144545int(10) unsigned End position in chromosome

Connected Tables and Joining Fields
        mm39.wgEncodeGencodeAttrsVM28.transcriptId (via wgEncodeGencodeExonSupportVM28.transcriptId)

Sample Rows
 
transcriptIdseqIdseqSrcexonIdchromchromStartchromEnd
ENSMUST00000193812.2AK016604.1EMBLENSMUSE00001343744.2chr131434753144545
ENSMUST00000082908.3RF00026-AAHY01003237.1/2045-2154RFAMENSMUSE00000522066.2chr131722383172348
ENSMUST00000162897.2AK220428.1EMBLENSMUSE00000858910.2chr132838313286567
ENSMUST00000162897.2AK220428.1EMBLENSMUSE00000866652.2chr132761233277540
ENSMUST00000159265.2AK135172.1EMBLENSMUSE00000863980.2chr132836613285855
ENSMUST00000159265.2AK135172.1EMBLENSMUSE00000867897.2chr132767453277540
ENSMUST00000070533.5DA708570.1EMBLENSMUSE00000485541.4chr137407743741721
ENSMUST00000070533.5AY534250.1EMBLENSMUSE00000485541.4chr137407743741721
ENSMUST00000070533.5Q5GH67.1Uniprot/SWISSPROTENSMUSE00000485541.4chr137407743741721
ENSMUST00000070533.5Q5GH67Uniprot/SWISSPROTENSMUSE00000485541.4chr137407743741721

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.