Schema for ensPep
  Database: oryLat2    Primary Table: ensPep    Row Count: 24,674   Data last updated: 2018-05-08
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSORLT00000000001.1varchar(255) values Name of gene - same as in genePred
seq MFFFKMPSTPFFFLLGIILFLTWFTKE...longblob   Peptide sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      oryLat2.ensGene.name (via ensPep.name)
      oryLat2.ensGtp.transcript (via ensPep.name)
      oryLat2.ensemblSource.name (via ensPep.name)
      oryLat2.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSORLT00000000001.1MFFFKMPSTPFFFLLGIILFLTWFTKEVLSEKVLLGLKGSSVVLSPGDAETSITSIRWKHGDDLAADWFGGNPTFYRSFNDLCSLNTETGELTINNVRPEHGGDYTPEINGKILSAKKVQVFSPVPKP ...
ENSORLT00000000002.1MAELQMLLEEEIPAGRSALLDSFTNLERVAEYCESNYVQSPDKQRALEETKNYTTQSLASVAYLINTLANNVLQMLDIQASQLRRMESSINHISQTVDIHKEKVARREIGILTTNKNTSRTHKIIAPA ...
ENSORLT00000000003.1MAELQMLLEEEIPAGRSALLDSFTNLERVAEYCESNYVQSPDKQRALEETKNYTTQSLASVAYLINTLANNVLQMLDIQASQLRRMESSINHISQTVDIHKEKVARREIGILTTNKNTSRTHKIIAPA ...
ENSORLT00000000004.1MATGRKGSTSKAGGVRFPDDDEPPGSPTRRDDRSEVSSLLAVREKDGSFLVKAGFLKSHHTYEVVFTLPEVPALGRELSTAPSSSPSRRTPNLRVQRIGATLEGGVKVTCEYRTHQEGVTQEDLTLVT ...
ENSORLT00000000005.1MEEQRRAMEEEQRRVEEQRRAMEEEQRRREREEAENRRAREEFNRIDENRALEAKREQELREHQEHQEHQERLDRQAWRRQQAPQGGCSIL
ENSORLT00000000006.1CFCDPEEGPDEPPLHSIHAPNRIRPSSYRALRSAVSSLARIDDFFCEKIGSGFFSEVFKVQHRITGQVMALKMNTLASNKANMLREVQLMNRLCHPNILRFLGVCVHEGQLHALTEYINGGNLEQLLD ...
ENSORLT00000000007.1MLDFAIFAVTFVVILVGAVLYLYPSSRRASGVPGLFPTDEKDGNLQDIVGRGSLHEFLVSLHEQFGPVASFWFGRQPVVSLGSVDPLRQHINPNHTTDSFETMLKSLLGYQAGAGGGANESVMRKKLY ...
ENSORLT00000000008.1LAVKMQILTPHVYWAQRHGEIFLRVELSDAKNLDISLNQNNTLHFRALGHGAKGDNEYKFSLEFLEPVRPEIDHKSTQRQVDIKIRKQRVRWWDRLTLQEKKPLFLAPDFDRWLDESDAETELQAQEE ...
ENSORLT00000000009.1RDLFQKMRARELPPLPQRGQRSLPAMSSVDTTAEIPAAKRKKKRARKDVEGVDDTDDQGMEMGGVSSRRSSEIGEQLTLEGATEALPQRRRRKKKTPTIDLEDDQADLVNGDEADQTTDGEEVAKKPK ...
ENSORLT00000000010.1MQILTPHVYWAQRHGEIFLRVELSDAKVGRSSAECFWTALGHGAKGDNEYKFSLEFLEPVRPEIDHKSTQRQVDIKIRKQRVRWWDRLTLQEKKPLFLAPDFDRWLDESDAETELQAQEQKISKINVE ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.