Schema for ensPep
  Database: otoGar3    Primary Table: ensPep    Row Count: 19,986   Data last updated: 2021-05-25
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSOGAT00000000002.2varchar(255) values Name of gene - same as in genePred
seq QPRKIEEIKDFLLTARRKDAKSVKIKK...longblob   Peptide sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      otoGar3.ensGene.name (via ensPep.name)
      otoGar3.ensGtp.transcript (via ensPep.name)
      otoGar3.ensemblSource.name (via ensPep.name)
      otoGar3.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSOGAT00000000002.2QPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKELK
ENSOGAT00000000003.2WQAASVSYGSDWRVLLXHSVPHLGLRLQPVDSSFSPRDENYQESLLFLGLVAAVCLGLNLLFLVAYLVCVCCCKRDDMVQTKQRHSCCVTWTAVVAGLICCAAVGVGFYGNSETNDGVYQLIYSLDDA ...
ENSOGAT00000000004.2MEIVYVYLKKRSEFGKQCNFSDRQAELNIDIPPNPELAEQFVERSPVDTGIQCSATMSEHEANTERFEMETRGVNHVEGGWPKDVNPMELEQTIRFRKKVEKDENYINAIMQLGSIMEHCIKQNNAID ...
ENSOGAT00000000005.1MQVLTKCYPKNCLLTVMDRYSAEVRNMEQVVMIPSLLRGVQLSVPGGQAEPDAPDLYAYFTMLKTIRVDVDHGLLPREEWQARVAGNKADEAENEAAETEETEDERASGELDLEAQFHMHFSSLHHIL ...
ENSOGAT00000000006.2MPPERRSRMKPDRRAAARQTRKTRMKPDRRARSRPGGPPRKAAPSSQRKLPARPNAAAAAIAVAAAEEERRLRQRNRLTLEEDKPAVERCLEELVFGDVGDDEDSLLRRLRGPRVQEHEDSGDSEVEN ...
ENSOGAT00000000008.2MVLDSGDQVYEQAPPSPPGSPSSLHHKLKPSDQDVPPRYPWPQSLALPLALAVPSALQPQPERHLSSKLHMGYRSHMRRSESTYTVNSTGQQRCGTQRRALSGQGRSLGGGNLRSAASLPHIAKTRKD ...
ENSOGAT00000000009.2MDSAAKDEMQPALPSGPEWPEQERAEQLARGAALKWASGIFYRPEQLARLGQYRSREVQRTCSLEARIKSVVQSYLEGVQTGVWQLAQALEAVQETREALSQAHGLLQGISKSSQTLQPLREQVSQHK ...
ENSOGAT00000000010.2MAEAGPQAPPPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNV ...
ENSOGAT00000000011.2MSPPRNVVKIAVQMRDAIPQLIQLDQAKPLAAVLKEVCDAWSLTHSERYALQFADGHKRYITENNRAEIKNGSILCLSTAPDLEAERLLGGLQSGSREERREALRRFVLLASDMTFAREVISRDGLQR ...
ENSOGAT00000000012.2AQGRRRQGCDGGVAAPGDAHIYSELPAPVRSERSLPCESGLVLCSPECPSFAIKSLGLRGISCISLTDLDGSPTSQQVLQSVAHHMGPHLQSLCLGGGSPTEASFVALVLGCPVLRILDLSGCNSLFT ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.