|
|
Database: oviAri1 Primary Table: xenoMrna Row Count: 5,525,770   Data last updated: 2016-02-16
On download server: MariaDB table dump directory
field | example | SQL type |
bin | 73 | smallint(5) unsigned |
matches | 2437 | int(10) unsigned |
misMatches | 346 | int(10) unsigned |
repMatches | 0 | int(10) unsigned |
nCount | 4 | int(10) unsigned |
qNumInsert | 9 | int(10) unsigned |
qBaseInsert | 1225 | int(10) unsigned |
tNumInsert | 23 | int(10) unsigned |
tBaseInsert | 127074 | int(10) unsigned |
strand | ++ | char(2) |
qName | CR861421 | varchar(255) |
qSize | 4435 | int(10) unsigned |
qStart | 107 | int(10) unsigned |
qEnd | 4119 | int(10) unsigned |
tName | chr1 | varchar(255) |
tSize | 299839927 | int(10) unsigned |
tStart | 2965 | int(10) unsigned |
tEnd | 132826 | int(10) unsigned |
blockCount | 24 | int(10) unsigned |
blockSizes | 84,85,90,110,207,216,207,10... | longblob |
qStarts | 107,219,304,568,678,885,110... | longblob |
tStarts | 2965,4119,6059,7065,11912,1... | longblob |
|
| |
|
|
Connected Tables and Joining Fields
|
|
Sample Rows
|
|
bin | matches | misMatches | repMatches | nCount | qNumInsert | qBaseInsert | tNumInsert | tBaseInsert | strand | qName | qSize | qStart | qEnd | tName | tSize | tStart | tEnd | blockCount | blockSizes | qStarts | tStarts |
---|
73 | 2437 | 346 | 0 | 4 | 9 | 1225 | 23 | 127074 | ++ | CR861421 | 4435 | 107 | 4119 | chr1 | 299839927 | 2965 | 132826 | 24 | 84,85,90,110,207,216,207,108,105,78,140,20,85,114,88,223,30,104,135,144,189,129,72,24, | 107,219,304,568,678,885,1101,1308,1416,1521,1600,1740,1760,1845,1959,2174,3102,3133,3237,3372,3516,3819,3963,4095, | 2965,4119,6059,7065,11912,12366,13002,13332,14245,14625,15943,16728,16749,16955,17843,20258,129026,129736,130008,131045,131775,1 ... |
73 | 2515 | 349 | 0 | 4 | 10 | 3367 | 24 | 128739 | ++ | CR859426 | 6333 | 72 | 6307 | chr1 | 299839927 | 2965 | 134572 | 25 | 84,85,90,110,207,216,207,108,105,78,140,20,85,114,88,223,30,104,135,144,189,129,72,24,81, | 72,184,269,533,643,850,1066,1273,1381,1486,1565,1705,1725,1810,1924,2139,3067,3098,3202,3337,3481,3784,3928,4060,6226, | 2965,4119,6059,7065,11912,12366,13002,13332,14245,14625,15943,16728,16749,16955,17843,20258,129026,129736,130008,131045,131775,1 ... |
73 | 2365 | 395 | 0 | 4 | 6 | 1155 | 24 | 127033 | ++ | BC105748 | 4414 | 66 | 3985 | chr1 | 299839927 | 2976 | 132773 | 25 | 73,3,110,90,108,207,216,207,108,105,79,2,143,85,114,87,220,30,3,102,135,140,193,129,75, | 66,139,142,252,518,626,833,1049,1256,1364,1469,1548,1550,1708,1793,1907,2125,3050,3080,3083,3185,3320,3460,3767,3910, | 2976,3054,4094,6059,7067,11912,12366,13002,13332,14245,14625,14949,15945,16749,16955,17843,20261,129026,129102,129738,130008,131 ... |
73 | 2345 | 411 | 0 | 5 | 7 | 1158 | 24 | 127036 | ++ | U90725 | 4413 | 66 | 3985 | chr1 | 299839927 | 2976 | 132773 | 25 | 73,3,106,92,108,207,216,207,108,105,79,2,143,85,114,87,220,30,3,102,135,140,193,129,74, | 66,139,142,250,518,626,833,1049,1256,1364,1469,1548,1550,1708,1793,1907,2125,3050,3080,3083,3185,3320,3460,3767,3911, | 2976,3054,4094,6057,7067,11912,12366,13002,13332,14245,14625,14949,15945,16749,16955,17843,20261,129026,129102,129738,130008,131 ... |
73 | 2386 | 414 | 0 | 4 | 7 | 1211 | 25 | 127064 | ++ | BC023806 | 4421 | 78 | 4093 | chr1 | 299839927 | 2976 | 132844 | 26 | 73,3,110,89,108,207,216,207,108,105,79,2,143,85,114,88,219,30,3,102,135,144,189,129,74,42, | 78,151,154,264,530,638,845,1061,1268,1376,1481,1560,1562,1720,1805,1919,2138,3062,3092,3095,3197,3332,3476,3779,3923,4051, | 2976,3054,4094,6059,7067,11912,12366,13002,13332,14245,14625,14949,15945,16749,16955,17843,20262,129026,129102,129738,130008,131 ... |
73 | 2386 | 414 | 0 | 4 | 7 | 1211 | 25 | 127064 | ++ | BC025648 | 4469 | 119 | 4134 | chr1 | 299839927 | 2976 | 132844 | 26 | 73,3,110,89,108,207,216,207,108,105,79,2,143,85,114,88,219,30,3,102,135,144,189,129,74,42, | 119,192,195,305,571,679,886,1102,1309,1417,1522,1601,1603,1761,1846,1960,2179,3103,3133,3136,3238,3373,3517,3820,3964,4092, | 2976,3054,4094,6059,7067,11912,12366,13002,13332,14245,14625,14949,15945,16749,16955,17843,20262,129026,129102,129738,130008,131 ... |
73 | 2386 | 414 | 0 | 4 | 7 | 1211 | 25 | 127064 | ++ | BC027779 | 4431 | 92 | 4107 | chr1 | 299839927 | 2976 | 132844 | 26 | 73,3,110,89,108,207,216,207,108,105,79,2,143,85,114,88,219,30,3,102,135,144,189,129,74,42, | 92,165,168,278,544,652,859,1075,1282,1390,1495,1574,1576,1734,1819,1933,2152,3076,3106,3109,3211,3346,3490,3793,3937,4065, | 2976,3054,4094,6059,7067,11912,12366,13002,13332,14245,14625,14949,15945,16749,16955,17843,20262,129026,129102,129738,130008,131 ... |
73 | 2464 | 419 | 0 | 4 | 8 | 3257 | 26 | 128711 | ++ | BC027788 | 6256 | 92 | 6236 | chr1 | 299839927 | 2976 | 134574 | 27 | 73,3,110,89,108,207,216,207,108,105,79,2,143,85,114,88,219,30,3,102,135,144,189,129,74,42,83, | 92,165,168,278,544,652,859,1075,1282,1390,1495,1574,1576,1734,1819,1933,2152,3076,3106,3109,3211,3346,3490,3793,3937,4065,6153, | 2976,3054,4094,6059,7067,11912,12366,13002,13332,14245,14625,14949,15945,16749,16955,17843,20262,129026,129102,129738,130008,131 ... |
585 | 517 | 115 | 0 | 0 | 5 | 381 | 7 | 9427 | ++ | EZ767052 | 1060 | 47 | 1060 | chr1 | 299839927 | 2979 | 13038 | 8 | 25,63,45,108,207,18,145,21, | 47,159,267,499,607,814,848,1039, | 2979,4125,6094,7067,11912,12366,12399,13017, |
585 | 1307 | 381 | 0 | 0 | 7 | 488 | 14 | 15697 | ++ | BC155110 | 3307 | 59 | 2235 | chr1 | 299839927 | 2979 | 20364 | 15 | 25,78,39,108,207,216,207,111,107,74,138,81,108,87,102, | 59,171,297,525,633,840,1056,1263,1374,1481,1557,1719,1800,1914,2133, | 2979,4125,6094,7067,11912,12366,13002,13332,14248,14630,15945,16753,16955,17843,20262, |
|
Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
| |
|
|
|