Schema for ensPep
  Database: papAnu2    Primary Table: ensPep    Row Count: 20,977   Data last updated: 2017-10-10
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSPANT00000000006.1varchar(255) values Name of gene - same as in genePred
seq MTTMNLLLLIMSTLAAMAFLTLVERKL...longblob   Peptide sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      papAnu2.ensGene.name (via ensPep.name)
      papAnu2.ensGtp.transcript (via ensPep.name)
      papAnu2.ensemblSource.name (via ensPep.name)
      papAnu2.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSPANT00000000006.1MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYA ...
ENSPANT00000000010.1MNPLAQLIIYTTVITGTLITMLSSHWFLAWAGLEMNMLAFIPTLIKKTNARSTEAATKYFLAQSTASMILMMAIISNNLLSGHWTTTTTNYTNQFPPLAMTIALTMKLGMAPFHFWVPEVTQGTPLTS ...
ENSPANT00000000016.1MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTAVEAGAGTGWTV ...
ENSPANT00000000019.1MAHPVQLGLQDATSPVMEELITFHDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFL ...
ENSPANT00000000021.1MPQLDTSTWFTIIMAMLPTLYLITQLKLLSMNYYQPPLTKNPNLQTHNTCWRPKWTKTYLPHSQPQQS
ENSPANT00000000022.1MNENLFTSFSAPTILGQPATIPIIMFPTLLIPTSKHLINNQLTTVQQNLIKLILKQMMAPHNAKGQSWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTIITGLRFKTKNFLAHM ...
ENSPANT00000000023.1MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNVLTMYQWWRDIIRESTYQGHHTMPVQKSLRYGMTLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLE ...
ENSPANT00000000025.1MNLMLALTVNTLLTALLTIIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTANLPTMIKTSIMFIIILALSLAYEWTQKGLDWTE
ENSPANT00000000027.1MTPTHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTAVMASNAHSPLINIMPIIMLVFAACEAAVGLALLVSISNTYGLDHINNLSLLQC
ENSPANT00000000028.1MLKMVIPTTMLLPTTWLSKDSTIWINLTTHSLTISLIPLLFFNQTDNNLLSHSIHLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNEPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIP ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.