Schema for ensPep
  Database: rheMac8    Primary Table: ensPep    Row Count: 45,293   Data last updated: 2019-01-11
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSMMUT00000000001.3varchar(255) values Name of gene - same as in genePred
seq MGSGGVVHCRCAKCFCYPTKRRIRRRP...longblob   Peptide sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      rheMac8.ensGene.name (via ensPep.name)
      rheMac8.ensGtp.transcript (via ensPep.name)
      rheMac8.ensemblSource.name (via ensPep.name)
      rheMac8.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSMMUT00000000001.3MGSGGVVHCRCAKCFCYPTKRRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHSQLKDLVDNHASVWACASFQELWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYNEGLSVSDEARAEVNG ...
ENSMMUT00000000002.3MAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSMQTSDSMDAAAAKTQFLRNIQTASGGSQPRLSAAEVEAEARRLRKACSLLRLRVREELSAAPMDWMQEYRCLLTLEGLQAMVGQ ...
ENSMMUT00000000005.3LLCKMLLLAHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISERLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFTCMG ...
ENSMMUT00000000007.2MTVKYYIRQGGEGVPPGSYGNYGYANSGYSACEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNKLLSEMDSQFDSTTGFLGKTMGKLKILSRGSQTKLLCYMMLFSLFVFFIIYWIIKLR
ENSMMUT00000000009.3MAAALWGFFPVLLLLLLSGDVQSSEVPGAAAEGSGGSGVGIGDRFKIEGRAVVPGVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRFDPVRVDITSKGKMRARYVNHIKT ...
ENSMMUT00000000011.2MGISRDSWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLMDSTPHRQWYESHYALPLGRKKGKK ...
ENSMMUT00000000012.3MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTLKSPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACASHLPEKLHHDSRTYLVNSSDS ...
ENSMMUT00000000014.3MTMCLWLKLLAFVFAFLDTEVFVTGKTTKMPSVPLSSDPLPTHTTAFSPASISERENDFSETTPSLSSDNTSTHVSPDSLDNASAFNTTGVSSALTPHLPTHADSQTPSTGTDTQTPSGSAANTTLSP ...
ENSMMUT00000000016.2MTMCLWLKLLAFVFAFLDTEVFVTVSYLNASETTTPSPSGSTVISTPTIGDVTLSHTEKYATIPVDYLYNNKTKLFTAKLNVNENVECTNNNHTHNICTNNEVLNLPECKEMNVFVSHNSCTDRHKEL ...
ENSMMUT00000000019.3MTAIRLREFIERRPLIPPSIFIAHQGRDLQGYYPGQLARLHFDHGAKRAPRHSKPAEPWYKETTYQRDYSLPFYEIDWNQKLATVSLNPRPLNSLPELYCCEERGGFERNAFKLK

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.