Schema for ensPep
  Database: rn5    Primary Table: ensPep    Row Count: 26,153   Data last updated: 2014-12-03
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSRNOT00000000006varchar(255) values Name of gene - same as in genePred
seq MAAVAVLRNDSLQAFLQDRTPSASPDL...longblob   Peptide sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      rn5.ensGene.name (via ensPep.name)
      rn5.ensGtp.transcript (via ensPep.name)
      rn5.ensemblSource.name (via ensPep.name)
      rn5.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSRNOT00000000006MAAVAVLRNDSLQAFLQDRTPSASPDLGKHSPALLAATCSRIGQPGAAAAPDFLQVPYDPALGSPSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEFSPVK ...
ENSRNOT00000000008MASSTPSPATSSNAGADPNTTNLRPTTYDTWCGVAHGCTRKLGLKICGFLQRTNSLEEKSRLVSAFRERQASKNLLSCENSDPGARFRRTETDFSNLFAQDLLPAKNGEEQTVQFLLEVVDILLNYVR ...
ENSRNOT00000000009MNAETCVSYCESPATAMDAYYSPVSQSREGSSPFRGFPGGDKFGTTFLSAAAKGQGFGDAKGRARYGAGQQDLAAPLESNAGARGSFNKFQPQPPTPQPPPAPPAPPAHLYLQRGACKTPPDGSLKLQ ...
ENSRNOT00000000010MEDVGQNLLDDEDEITEIPTLEAIKQNLKYLNSDLEKDLQRLDEANQTLLRKIQKKEESIQSLERDIALSIGRVPERDDFNEIIVQKETALKDLELEIAKLEKKNKTLSKNVMELQKKISKGTKNAVS ...
ENSRNOT00000000011MLGVVELLLLGAAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTALGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQ ...
ENSRNOT00000000013MAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGLEAARRGPGPGSGRRASGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLL ...
ENSRNOT00000000015GQEELQANLDLIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCSTLLVVGDNSPAVEAVVECNSRLDPINTTLLKKADC
ENSRNOT00000000018MEISKNITNPEELWKMKPKGNLEDDSYSTKDTGETSMLKRPVLSPLPHTVHVDAFDCPTELQHTQELFPNWQLPIKVAAVLSSLTFLYTLLREIIYPLVASREQYFYKIPILVVNKVLPMVSITLLAL ...
ENSRNOT00000000025MLGMIRNSLFGSVETWPWQVLSTGGKEDVSYEERACEGGKFATVEVTDKPVDEALREAMPKIMKYVGGTNDKGVGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQGSPPTPSDQSVKIEEREGI ...
ENSRNOT00000000026MGDLEKGAATHGAGCFAKIKVFLMALTCAYVSKSLSGTFMSSMLTQIERQFGIPTAIVGFINGSFEIGNLLLIIFVSYFGMKLHRPIVIGVGCAVMGLGCFIISLPHFLMGRYEYETTILPTSNLSSN ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.