Schema for ensPep
  Database: tarSyr1    Primary Table: ensPep    Row Count: 13,675   Data last updated: 2017-10-10
Format description: A predicted peptide - linked to a predicted gene.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSTSYT00000000002.1varchar(255) values Name of gene - same as in genePred
seq MMSGRPGRVPLQFLPDEARSLPPPKLT...longblob   Peptide sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      tarSyr1.ensGene.name (via ensPep.name)
      tarSyr1.ensGtp.transcript (via ensPep.name)
      tarSyr1.ensemblSource.name (via ensPep.name)
      tarSyr1.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSTSYT00000000002.1MMSGRPGRVPLQFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLLDNALRRRPVMFTGLHRQLLYVTSFYFIGYYLLKRQDYMYAVRDHDMFAYIKSHPEDFPEKKDEKTYGEIFEKFYPVR
ENSTSYT00000000003.1VDMFNSDMIISDPAAEASRAGKKQLRGVQNPHLSAQVGVRHKSLSIKDKISEWEGKKESLAPVPGRRAEGQEDYLTSCVIGRRSSDGVRTWVSKAKNKTRPETESIEEKNKGAVKVGVQDPERGQVLX ...
ENSTSYT00000000004.1RRLDLKFLHRFLQIQKVLFPSWSSQNALMFLTLLCVTIQQLVIYQVGLIPSQYYGVLGNKDLDGFKTLTFLAVLLIVLNSTLKSFDQFTCNLLYVNWRKDLTEHXXXXXXXXXXXXXXXXXXXXXXXX ...
ENSTSYT00000000005.1LTEGGEERMEASQEDLHLRRQQYLQEGQNSSFQARGEKPYSLKIRNTTSCNSGRYRCTLQDLEGQRNLSGTVILRVTXXXXXXKEDNFKKHRAEMGLLLALLVFYLALIIATCKFARLQSIFPDFSKP ...
ENSTSYT00000000006.1MRILLLLHWLGAFLSCSGHIQAEHSQYHTPPEVVIPQKVIETSRGMKPQGWISYSLFFGGQKHIVHIKVKKLLVSKHLPVFTYTDLGALLEDQSFVQNDCYYHGYVEGDPESLVSFSTCFGGFRGMLH ...
ENSTSYT00000000007.1MESSYLQKHLGTCLTQGLAEVARARPVDPIEYLALWIYKYKEIRRVKSRQKEMAELEHERELALMEQEMMERLKAEELLFQQQQLAFQLELEMQEKERQRIEELQRAQEQLEMEMRMSMENIAKSEDT ...
ENSTSYT00000000008.1APRMETDYLKKCFGDCLTQALAEVAKVRPSDPIEYLAHWLYHYRKTAKAKEENRQEKNQLKEEYDSCLKEIEMTQLLKQEECQIQQKCEKCHEELISKTVSTNKIIFMQEDMKPLEKENLKQESLPGT ...
ENSTSYT00000000009.1MGRKEEDDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRMTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL ...
ENSTSYT00000000010.1FVGVNASDINYSAGRYDPSVKPPMDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPANIATPVPSVKPEYLTLLVSGTTAYISLKELGELSEGKKVLVTAAAGGTGQFAVQLSKKAKC ...
ENSTSYT00000000011.1MTTEKSLVAEAAENSPHQQQKEDGEGAINSGQQETQLEEASQTATEGDHQCEQKLKTSNGDTPTHEDLTKNKERTSESRGLSRLFSSFLKRPKSQVSEEEGKEVESDKEKGEGGQKETEFGTSLDEEI ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.