Schema for ensGene
  Database: chlSab2    Primary Table: ensGene    Row Count: 28,078   Data last updated: 2021-05-25
Format description: Ensembl gene predictions.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
bin 585smallint(5) unsigned range Indexing field to speed chromosome range queries.
name ENSCSAT00000009426.1varchar(255) values Ensembl transcript ID
chrom chr1varchar(255) values Reference sequence chromosome or scaffold
strand +char(1) values + or - for strand
txStart 3828int(10) unsigned range Transcription start position (or end position for minus strand item)
txEnd 5154int(10) unsigned range Transcription end position (or start position for minus strand item)
cdsStart 3828int(10) unsigned range Coding region start (or end position for minus strand item)
cdsEnd 5154int(10) unsigned range Coding region end (or start position for minus strand item)
exonCount 3int(10) unsigned range Number of exons
exonStarts 3828,4413,5121,longblob   Exon start positions (or end positions for minus strand item)
exonEnds 3883,4613,5154,longblob   Exon end positions (or start positions for minus strand item)
score 0int(11) range always 0 for Ensembl genes
name2 ENSCSAG00000011340.1varchar(255) values Ensembl gene ID
cdsStartStat cmplenum('none', 'unk', 'incmpl', 'cmpl') values Status of CDS start annotation (none, unknown, incomplete, or complete)
cdsEndStat cmplenum('none', 'unk', 'incmpl', 'cmpl') values Status of CDS end annotation (none, unknown, incomplete, or complete)
exonFrames 0,1,0,longblob   Exon frame {0,1,2}, or -1 if no frame for exon

Connected Tables and Joining Fields
        chlSab2.ensGtp.transcript (via ensGene.name)
      chlSab2.ensPep.name (via ensGene.name)
      chlSab2.ensemblSource.name (via ensGene.name)
      chlSab2.ensemblToGeneName.name (via ensGene.name)
      knownGeneV39.knownToEnsembl.value (via ensGene.name)

Sample Rows
 
binnamechromstrandtxStarttxEndcdsStartcdsEndexonCountexonStartsexonEndsscorename2cdsStartStatcdsEndStatexonFrames
585ENSCSAT00000009426.1chr1+382851543828515433828,4413,5121,3883,4613,5154,0ENSCSAG00000011340.1cmplcmpl0,1,0,
585ENSCSAT00000009412.1chr1+73121016673121016667312,7558,8196,8599,9518,10076,7421,7759,8298,8721,9659,10166,0ENSCSAG00000011331.1cmplcmpl0,1,1,1,0,0,
585ENSCSAT00000023002.1chr1-11324114341143411434111324,11434,0ENSCSAG00000022912.1nonenone-1,
585ENSCSAT00000009401.1chr1-15561175691556117569415561,15871,16212,17550,15729,15928,16304,17569,0ENSCSAG00000011317.1cmplcmpl0,0,1,0,
585ENSCSAT00000009398.1chr1+190122547319090246371019012,19507,19643,20802,21482,22709,22896,23117,23575,24516,19174,19555,20234,20894,21633,22805,23041,23262,23695,25473,0ENSCSAG00000011307.1cmplcmpl0,0,0,0,2,0,0,1,2,2,
585ENSCSAT00000020682.1chr1+19572196431964319643119572,19643,0ENSCSAG00000020592.1nonenone-1,
585ENSCSAT00000009362.1chr1-26926489442692648944726926,29490,35262,43064,45973,46317,48663,26947,29700,35424,43165,46206,46509,48944,0ENSCSAG00000011291.1cmplcmpl0,0,0,1,2,2,0,
585ENSCSAT00000009272.1chr1+495576697449621669741449557,55069,58256,58376,58647,58883,61633,63294,63500,63616,64849,65951,66204,66878,49716,55148,58291,58432,58691,58970,61805,63374,63518,63727,64912,66032,66321,66974,0ENSCSAG00000011249.1cmplcmpl0,2,0,2,1,0,0,1,0,0,0,0,0,0,
585ENSCSAT00000009248.1chr1+93333989729333398972793333,93870,94120,96710,97930,98178,98830,93643,93909,95879,96806,98101,98346,98972,0ENSCSAG00000011172.1incmplcmpl0,1,1,2,2,2,2,
585ENSCSAT00000009200.1chr1+10213510837010281810837016102135,102659,103403,103690,104896,105679,106074,106351,106554,106781,107014,107518,107686,107972,108194,108304,102192,103077,103614,104126,105016,105811,106186,106424,106691,106915,107110,107616,107768,108102,108292,108370,0ENSCSAG00000011141.1cmplcmpl-1,0,1,2,0,0,0,1,2,1,0,0,2,0,1,0,

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.