Schema for ensPep
  Database: ci2    Primary Table: ensPep    Row Count: 19,858   Data last updated: 2010-11-16
Format description: The mRNA sequence that represents each UCSC Genes transcript.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSCINT00000000005varchar(255) values Name of gene
seq LWREIPEVADSGHPKDMSKDQIKLQQS...longblob   mRNA sequence

Connected Tables and Joining Fields
        ci2.ensGene.name (via ensPep.name)
      ci2.ensGtp.transcript (via ensPep.name)
      ci2.ensemblSource.name (via ensPep.name)
      ci2.ensemblToGeneName.name (via ensPep.name)
      knownGeneV39.knownToEnsembl.value (via ensPep.name)

Sample Rows
 
nameseq
ENSCINT00000000005LWREIPEVADSGHPKDMSKDQIKLQQSQFEVITSQASYLRSLNILVHHFMEDWAMESTDVLPSTDRKRLFSNIESVKNVEQRFLEDLEKHFWSDLKLTKVCDVIAKYAKQDFSVYILYIQNQVYQDRV ...
ENSCINT00000000006MELKKFDPSEFPSNYHDYKLLGKGGFGEVRACYHASLGRVALKLFRITGGRKDIKRAKRGLEKEAKILQRMKHPHIVTFYGVTSLFEKECLVMEFMEGGNLNELLMSKIVLSWTSRLRLLHELISAIS ...
ENSCINT00000000007EAKILQRMKHPHIVTFYGVTSLFGREGLVMEFMEGGNLDNILMSKIVLSWTGRLRLLHELISAISYLHNHDKKKAFVHGDIKPQNILLTKSRSLKLADFGSVNIRQRTCASTTTFEIPHSTQHTWPFT ...
ENSCINT00000000009MSYTNQLATVENGSQWLTCRVQYLDDTDPFSSTNFPEPTRPPSFTFNIDLPLCEQISGVHRLLKAPHKIGDCTLQLSNTSAYLDLDLSISEQREEFESFFADGVCLVTVGSQVQGSLWKRNSVIIRTQ ...
ENSCINT00000000010YFRMPPAVFDTLLKLVAPKIKKNDIQLSQASAAERLAITLRFLVTGDTYQTIAFSFRTHKATVSIIVPEVCKAIWEILQPQYMPRPTKEMWLQITEGFFRQWNFPNCIGSIDGKHVSLQAPANSGSLY ...
ENSCINT00000000012MRFQTKLVISAFLNKRKFCDSRFKIGSNFSYAISDDFRRSLCDIRDLIDFYAEYLDLPGIVTAETNRWKRKWSKTPNDSLPNDLCSSLAVATAEHYPNIRTMMKIMLTLPVTTATAERSFSQLRRLKT ...
ENSCINT00000000013YLRFQSSWLGQNKWLVYSPSKQGAFCKYCVLFSKKAAGGQNLGMFVHGPLNNYKKATEFIALHSTKKCHQLCKTQAEDFVQTFQSPAGNVVDQMSTHRKQQAIENRKVLGSIVETVKYCGRQNIALRG ...
ENSCINT00000000014RFQSSWLGQNKWLVYSPSKQGAFCKYCVLFSKKAAGGQNLGMFVHGPLNNYKKATEFIALHSTKKCHQLCKTQAEDFVQTFQSPAGNVVDQMSTHRKQQAIENRKVLGSIVETVKYCGRQNIALRGHR ...
ENSCINT00000000015MYSNVMVDRPYAAYDPRASLTAHVSFLQGHQQPIDSKSYPMANHPSASYYPGYEMIPHFAQSLESHLQEMHNSNSRNFHPVQYPTNSTLTNPIACKWRNVKNGGRSCDVIFHDMHELVNHVTRDHVGG ...
ENSCINT00000000017MYSNVMVDRPYAAYDPRASLTAHASFLQGHQQPIDSKSYSMANHPSASYYPGYGMIPHFAQSLESHLQGMHNFNSRENFHPVQYPTHSTLTNPIACKWRNVKNGGRSCDVIFHDMHELVNHVTRDHVG ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.