Schema for ensGene
  Database: criGriChoV1    Primary Table: ensGene    Row Count: 34,467   Data last updated: 2021-05-25
Format description: Ensembl gene predictions.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
bin 598smallint(5) unsigned range Indexing field to speed chromosome range queries.
name ENSCGRT00000032072.1varchar(255) values Ensembl transcript ID
chrom NW_003613580v1varchar(255) values Reference sequence chromosome or scaffold
strand -char(1) values + or - for strand
txStart 1776569int(10) unsigned range Transcription start position (or end position for minus strand item)
txEnd 1784525int(10) unsigned range Transcription end position (or start position for minus strand item)
cdsStart 1784525int(10) unsigned range Coding region start (or end position for minus strand item)
cdsEnd 1784525int(10) unsigned range Coding region end (or start position for minus strand item)
exonCount 2int(10) unsigned range Number of exons
exonStarts 1776569,1784301,longblob   Exon start positions (or end positions for minus strand item)
exonEnds 1776737,1784525,longblob   Exon end positions (or start positions for minus strand item)
score 0int(11) range always 0 for Ensembl genes
name2 ENSCGRG00000024622.1varchar(255) values Ensembl gene ID
cdsStartStat noneenum('none', 'unk', 'incmpl', 'cmpl') values Status of CDS start annotation (none, unknown, incomplete, or complete)
cdsEndStat noneenum('none', 'unk', 'incmpl', 'cmpl') values Status of CDS end annotation (none, unknown, incomplete, or complete)
exonFrames -1,-1,longblob   Exon frame {0,1,2}, or -1 if no frame for exon

Connected Tables and Joining Fields
        criGriChoV1.ensGtp.transcript (via ensGene.name)
      criGriChoV1.ensPep.name (via ensGene.name)
      criGriChoV1.ensemblSource.name (via ensGene.name)
      criGriChoV1.ensemblToGeneName.name (via ensGene.name)
      knownGeneV39.knownToEnsembl.value (via ensGene.name)

Sample Rows
 
binnamechromstrandtxStarttxEndcdsStartcdsEndexonCountexonStartsexonEndsscorename2cdsStartStatcdsEndStatexonFrames
598ENSCGRT00000032072.1NW_003613580v1-177656917845251784525178452521776569,1784301,1776737,1784525,0ENSCGRG00000024622.1nonenone-1,-1,
74ENSCGRT00000013700.1NW_003613580v1-183455118560291835791185491661834551,1840628,1846105,1851879,1854678,1855720,1836076,1840754,1846251,1852416,1855334,1856029,0ENSCGRG00000009790.1cmplcmpl0,0,1,1,0,-1,
599ENSCGRT00000014363.1NW_003613580v1+185998818611621859988186116241859988,1860013,1860205,1861072,1859990,1860062,1860340,1861162,0ENSCGRG00000010241.1incmplcmpl0,2,0,0,
599ENSCGRT00000014364.1NW_003613580v1+185998818604241859988186042441859988,1860013,1860205,1860394,1859990,1860062,1860340,1860424,0ENSCGRG00000010241.1incmplincmpl0,2,0,0,
599ENSCGRT00000025372.1NW_003613580v1-186045718611651860457186116521860457,1861105,1860559,1861165,0ENSCGRG00000018131.1incmplincmpl0,0,
74ENSCGRT00000012752.1NW_003613580v1-189072920421621892720204192071890729,1894450,1897346,1919720,1930543,2037074,2041754,1892835,1894557,1897596,1919803,1932372,2037317,2042162,0ENSCGRG00000009131.1cmplcmpl2,0,2,0,1,1,0,
600ENSCGRT00000013302.1NW_003613580v1-2053759207379920545172073685102053759,2054487,2056609,2057063,2059546,2059714,2060333,2063718,2064831,2073629,2053891,2054524,2056706,2057219,2059611,2059858,2060538,2063850,2064866,2073799,0ENSCGRG00000009521.1cmplcmpl-1,2,1,1,2,2,1,1,2,0,
600ENSCGRT00000013303.1NW_003613580v1-205387720737892053887207368592053877,2056609,2057063,2059546,2059714,2060333,2063718,2064831,2073629,2053891,2056706,2057219,2059611,2059858,2060538,2063850,2064866,2073789,0ENSCGRG00000009521.1cmplcmpl2,1,1,2,2,1,1,2,0,
600ENSCGRT00000009229.1NW_003613580v1+207381920867552073912208520252073819,2077050,2082456,2082587,2084399,2074026,2077145,2082500,2082710,2086755,0ENSCGRG00000006637.1cmplcmpl0,0,2,1,1,
9ENSCGRT00000010067.1NW_003613580v1-2087447212303520874472123035212087447,2088922,2089603,2090568,2091111,2094968,2097138,2099493,2099995,2100832,2103789,2104734,2107161,2109047,2110277,2112689, ...2087595,2089034,2089776,2090767,2091225,2095106,2097308,2099633,2100181,2101014,2103915,2104903,2107278,2109176,2110385,2112852, ...0ENSCGRG00000007252.1cmplincmpl2,1,2,1,1,1,2,0,0,1,1,0,0,0,0,2,2,0,0,0,0,

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.