Schema for estOrientInfo
  Database: dm1    Primary Table: estOrientInfo    Row Count: 909,903   Data last updated: 2016-05-25
Format description: Extra information on ESTs - calculated by polyInfo program
On download server: MariaDB table dump directory
fieldexampleSQL type description
bin 585smallint(5) unsigned Indexing field to speed chromosome range queries.
chrom chr2Lvarchar(255) Reference sequence chromosome or scaffold
chromStart 9844int(10) unsigned Start position in chromosome
chromEnd 10361int(10) unsigned End position in chromosome
name AA816352varchar(255) Accession of EST
intronOrientation 0smallint(6) Orientation of introns with respect to EST
sizePolyA 0smallint(6) Number of trailing A's
revSizePolyA 0smallint(6) Number of trailing A's on reverse strand
signalPos 0smallint(6) Position of start of polyA signal relative to end of EST or 0 if no signal
revSignalPos 18smallint(6) PolyA signal position on reverse strand if any

Connected Tables and Joining Fields
        dm1.all_est.qName (via estOrientInfo.name)
      dm1.est.qName (via estOrientInfo.name)
      dm1.intronEst.qName (via estOrientInfo.name)
      hgFixed.gbCdnaInfo.acc (via estOrientInfo.name)
      hgFixed.gbSeq.acc (via estOrientInfo.name)
      hgFixed.imageClone.acc (via estOrientInfo.name)

Sample Rows
 
binchromchromStartchromEndnameintronOrientationsizePolyArevSizePolyAsignalPosrevSignalPos
585chr2L984410361AA816352000018
585chr2L1079411203AA538811003024
585chr2L1548018473AA43924120000
585chr2L1553918560AA24624320000
585chr2L1560518491AA54041820000
585chr2L1560918536AA20274320000
585chr2L1794018519AA80202800000
585chr2L2074521324AA80202800000
585chr2L2888035940AA69836120000
585chr2L6672069897AA80172800000

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.