Schema for pscreen
  Database: dm3    Primary Table: pscreen    Row Count: 7,672   Data last updated: 2008-05-01
Format description: P-Screen (BDGP Gene Disruption Project) P el. insertion locations/genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
bin 585smallint(5) unsigned range Indexing field to speed chromosome range queries.
chrom chr2Lvarchar(255) values Reference sequence chromosome or scaffold
chromStart 19501int(10) unsigned range Start position in chromosome
chromEnd 19502int(10) unsigned range End position in chromosome
name KG05323varchar(255) values Name of item (mutant strain with P el. insert here)
score 0int(10) unsigned range Score from 0-1000 (placeholder! for bed 6 compat)
strand -char(1) values + or -
stockNumber 13996int(10) unsigned range Mutant strain stock number, for ordering
geneCount 1int(10) unsigned range Number of genes disrupted by this insert
geneIds FBgn0002121,longblob   IDs of genes disrupted

Connected Tables and Joining Fields
        dm3.bdgpExprLink.flyBaseId (via pscreen.geneIds)
      dm3.fbAllele.geneId (via pscreen.geneIds)
      dm3.fbGene.geneId (via pscreen.geneIds)
      dm3.fbPhenotype.geneId (via pscreen.geneIds)
      dm3.fbSynonym.geneId (via pscreen.geneIds)
      dm3.fbTranscript.geneId (via pscreen.geneIds)
      dm3.flyBase2004Xref.fbgn (via pscreen.geneIds)

Sample Rows
 
binchromchromStartchromEndnamescorestrandstockNumbergeneCountgeneIds
585chr2L1950119502KG053230-139961FBgn0002121,
585chr2L3038830389MB020500+237841FBgn0051973,
585chr2L6695266953KG005690-131391FBgn0067779,
585chr2L6757567576EY047640+166151FBgn0067779,
585chr2L7695276953MB014610+231871FBgn0031214,
585chr2L8070780708EY092070+164450
585chr2L8887888879EY163320+212030
585chr2L9361693617EY090180-164390
585chr2L9542795428BG002670+124111FBgn0031216,
585chr2L102296102297EY091720+164441FBgn0031217,

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.