Schema for wgEncodeGencodeTranscriptSupportVM28
  Database: mm39    Primary Table: wgEncodeGencodeTranscriptSupportVM28    Row Count: 50,174   Data last updated: 2022-01-16
Format description: GENCODE transcript support from other datasets
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENSMUST00000070533.5varchar(255) values GENCODE transcript identifier
seqId CCDS14803.1varchar(255) values Identifier of sequence supporting transcript
seqSrc CCDSvarchar(255) values Source of supporting sequence

Connected Tables and Joining Fields
        mm39.wgEncodeGencodeAttrsVM28.transcriptId (via wgEncodeGencodeTranscriptSupportVM28.transcriptId)

Sample Rows
 
transcriptIdseqIdseqSrc
ENSMUST00000070533.5CCDS14803.1CCDS
ENSMUST00000070533.5Q5GH67Uniprot/SWISSPROT
ENSMUST00000027032.6NM_011283RefSeq_dna
ENSMUST00000027032.6CCDS14804.1CCDS
ENSMUST00000027035.10NM_011441RefSeq_dna
ENSMUST00000027035.10CCDS14805.1CCDS
ENSMUST00000116652.8D49474EMBL
ENSMUST00000116652.8CCDS14805.1CCDS
ENSMUST00000130201.8NM_025300.4RefSeq_dna
ENSMUST00000130201.8CCDS35504.1CCDS

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.