Schema for wgEncodeGencodeUniProtVM33
  Database: mm39    Primary Table: wgEncodeGencodeUniProtVM33    Row Count: 70,711   Data last updated: 2023-07-19
Format description: GENCODE transcript to UniProt peptide mapping
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENSMUST00000000001.5varchar(255) values GENCODE transcript identifier
acc Q9DC51varchar(255) values UniProt/Swiss-Prot accession
name Q9DC51.178varchar(255) values UniProt/Swiss-Prot entry name
dataset SwissProtenum('SwissProt', 'TrEMBL') values UniProt dataset

Connected Tables and Joining Fields
        mm39.wgEncodeGencodeAttrsVM33.transcriptId (via wgEncodeGencodeUniProtVM33.transcriptId)

Sample Rows
 
transcriptIdaccnamedataset
ENSMUST00000000001.5Q9DC51Q9DC51.178SwissProt
ENSMUST00000000003.14O08976O08976.145SwissProt
ENSMUST00000000003.14Q3UV89Q3UV89.126TrEMBL
ENSMUST00000000010.9P20615P20615.168SwissProt
ENSMUST00000000028.14Q3UI99Q3UI99.114TrEMBL
ENSMUST00000000028.14Q9Z1X9Q9Z1X9.143SwissProt
ENSMUST00000000033.12P09535P09535.182SwissProt
ENSMUST00000000049.6Q01339Q01339.172SwissProt
ENSMUST00000000058.7Q9WVC3Q9WVC3.159SwissProt
ENSMUST00000000080.8Q8BPQ2Q8BPQ2.156TrEMBL

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.