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Database: priPac1 Primary Table: xenoMrna Row Count: 2,097,926   Data last updated: 2016-02-16
On download server: MariaDB table dump directory
field | example | SQL type |
bin | 73 | smallint(5) unsigned |
matches | 103 | int(10) unsigned |
misMatches | 13 | int(10) unsigned |
repMatches | 0 | int(10) unsigned |
nCount | 0 | int(10) unsigned |
qNumInsert | 2 | int(10) unsigned |
qBaseInsert | 255 | int(10) unsigned |
tNumInsert | 5 | int(10) unsigned |
tBaseInsert | 496095 | int(10) unsigned |
strand | +- | char(2) |
qName | BC006628 | varchar(255) |
qSize | 2090 | int(10) unsigned |
qStart | 1240 | int(10) unsigned |
qEnd | 1611 | int(10) unsigned |
tName | chrUn | varchar(255) |
tSize | 174852139 | int(10) unsigned |
tStart | 4542 | int(10) unsigned |
tEnd | 500753 | int(10) unsigned |
blockCount | 6 | int(10) unsigned |
blockSizes | 29,25,3,21,11,27, | longblob |
qStarts | 1240,1283,1308,1311,1332,1584, | longblob |
tStarts | 174351386,174489844,1744901... | longblob |
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Connected Tables and Joining Fields
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Sample Rows
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bin | matches | misMatches | repMatches | nCount | qNumInsert | qBaseInsert | tNumInsert | tBaseInsert | strand | qName | qSize | qStart | qEnd | tName | tSize | tStart | tEnd | blockCount | blockSizes | qStarts | tStarts |
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73 | 103 | 13 | 0 | 0 | 2 | 255 | 5 | 496095 | +- | BC006628 | 2090 | 1240 | 1611 | chrUn | 174852139 | 4542 | 500753 | 6 | 29,25,3,21,11,27, | 1240,1283,1308,1311,1332,1584, | 174351386,174489844,174490101,174493330,174499627,174847570, |
73 | 103 | 13 | 0 | 0 | 2 | 255 | 5 | 496095 | +- | BC053333 | 2809 | 1350 | 1721 | chrUn | 174852139 | 4542 | 500753 | 6 | 29,25,3,21,11,27, | 1350,1393,1418,1421,1442,1694, | 174351386,174489844,174490101,174493330,174499627,174847570, |
73 | 103 | 13 | 0 | 0 | 2 | 255 | 5 | 496095 | +- | BC071269 | 2827 | 1405 | 1776 | chrUn | 174852139 | 4542 | 500753 | 6 | 29,25,3,21,11,27, | 1405,1448,1473,1476,1497,1749, | 174351386,174489844,174490101,174493330,174499627,174847570, |
73 | 103 | 13 | 0 | 0 | 2 | 255 | 5 | 496095 | +- | BC075733 | 2626 | 1225 | 1596 | chrUn | 174852139 | 4542 | 500753 | 6 | 29,25,3,21,11,27, | 1225,1268,1293,1296,1317,1569, | 174351386,174489844,174490101,174493330,174499627,174847570, |
73 | 105 | 24 | 0 | 0 | 1 | 1 | 6 | 345426 | ++ | AK048453 | 3424 | 1859 | 1989 | chrUn | 174852139 | 14860 | 360415 | 7 | 21,15,3,38,9,12,31, | 1859,1881,1896,1899,1937,1946,1958, | 14860,15000,15024,351810,356114,356940,360384, |
585 | 346 | 175 | 0 | 0 | 7 | 397 | 7 | 928 | ++ | AY332607 | 5119 | 352 | 1270 | chrUn | 174852139 | 15856 | 17305 | 8 | 54,45,11,105,108,69,72,57, | 352,475,529,589,721,865,964,1213, | 15856,16019,16121,16224,16399,16582,16723,17248, |
585 | 346 | 175 | 0 | 0 | 7 | 397 | 7 | 928 | ++ | AY332608 | 2604 | 132 | 1050 | chrUn | 174852139 | 15856 | 17305 | 8 | 54,45,11,105,108,69,72,57, | 132,255,309,369,501,645,744,993, | 15856,16019,16121,16224,16399,16582,16723,17248, |
585 | 471 | 261 | 0 | 0 | 5 | 1530 | 8 | 2190 | ++ | BC045403 | 3668 | 229 | 2491 | chrUn | 174852139 | 15856 | 18778 | 9 | 81,64,143,66,75,78,60,57,108, | 229,505,569,742,841,916,1030,1090,2383, | 15856,16263,16370,16582,16723,16862,17143,17248,18670, |
585 | 185 | 108 | 0 | 0 | 2 | 58 | 3 | 192 | ++ | AK308829 | 1636 | 570 | 921 | chrUn | 174852139 | 16019 | 16504 | 4 | 45,11,103,134, | 570,624,684,787, | 16019,16121,16224,16370, |
585 | 267 | 120 | 0 | 0 | 5 | 351 | 7 | 797 | ++ | CR855569 | 2295 | 426 | 1164 | chrUn | 174852139 | 16019 | 17203 | 8 | 45,18,6,5,103,137,13,60, | 426,474,495,501,540,643,844,1104, | 16019,16115,16134,16142,16224,16370,16610,17143, |
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Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
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