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Database: droMoj1 Primary Table: xenoMrna Row Count: 3,820,206   Data last updated: 2016-02-16
On download server: MariaDB table dump directory
field | example | SQL type |
bin | 585 | smallint(5) unsigned |
matches | 81 | int(10) unsigned |
misMatches | 8 | int(10) unsigned |
repMatches | 0 | int(10) unsigned |
nCount | 0 | int(10) unsigned |
qNumInsert | 2 | int(10) unsigned |
qBaseInsert | 2065 | int(10) unsigned |
tNumInsert | 3 | int(10) unsigned |
tBaseInsert | 11448 | int(10) unsigned |
strand | +- | char(2) |
qName | AK157191 | varchar(255) |
qSize | 3320 | int(10) unsigned |
qStart | 361 | int(10) unsigned |
qEnd | 2515 | int(10) unsigned |
tName | contig_0 | varchar(255) |
tSize | 53787 | int(10) unsigned |
tStart | 306 | int(10) unsigned |
tEnd | 11843 | int(10) unsigned |
blockCount | 4 | int(10) unsigned |
blockSizes | 27,11,27,24, | longblob |
qStarts | 361,2359,2370,2491, | longblob |
tStarts | 41944,52007,52384,53457, | longblob |
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Connected Tables and Joining Fields
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Sample Rows
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bin | matches | misMatches | repMatches | nCount | qNumInsert | qBaseInsert | tNumInsert | tBaseInsert | strand | qName | qSize | qStart | qEnd | tName | tSize | tStart | tEnd | blockCount | blockSizes | qStarts | tStarts |
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585 | 81 | 8 | 0 | 0 | 2 | 2065 | 3 | 11448 | +- | AK157191 | 3320 | 361 | 2515 | contig_0 | 53787 | 306 | 11843 | 4 | 27,11,27,24, | 361,2359,2370,2491, | 41944,52007,52384,53457, |
585 | 42 | 0 | 0 | 0 | 1 | 2 | 1 | 11489 | ++ | BC068191 | 1770 | 1448 | 1492 | contig_0 | 53787 | 309 | 11840 | 2 | 21,21, | 1448,1471, | 309,11819, |
585 | 42 | 0 | 0 | 0 | 1 | 2 | 1 | 11489 | ++ | BC068191 | 1770 | 1486 | 1530 | contig_0 | 53787 | 309 | 11840 | 2 | 21,21, | 1486,1509, | 309,11819, |
585 | 66 | 1 | 0 | 0 | 2 | 36 | 2 | 11467 | ++ | BC057290 | 5920 | 4801 | 4904 | contig_0 | 53787 | 309 | 11843 | 3 | 21,21,25, | 4801,4834,4879, | 309,1374,11818, |
585 | 36 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | ++ | CR652759 | 1274 | 7 | 49 | contig_0 | 53787 | 1208 | 1250 | 1 | 42, | 7, | 1208, |
585 | 80 | 8 | 0 | 0 | 3 | 809 | 4 | 27769 | +- | BX648730 | 8107 | 5802 | 6699 | contig_0 | 53787 | 1375 | 29232 | 5 | 14,16,15,15,28, | 5802,5817,5835,6656,6671, | 24555,25049,25290,52007,52384, |
585 | 80 | 8 | 0 | 0 | 4 | 814 | 4 | 27769 | +- | AK022114 | 3142 | 931 | 1833 | contig_0 | 53787 | 1375 | 29232 | 5 | 14,16,15,15,28, | 931,946,963,1784,1805, | 24555,25049,25290,52007,52384, |
585 | 38 | 0 | 0 | 0 | 0 | 0 | 1 | 376 | ++ | BC059505 | 1449 | 880 | 918 | contig_0 | 53787 | 1377 | 1791 | 2 | 17,21, | 880,897, | 1377,1770, |
585 | 56 | 1 | 0 | 0 | 0 | 0 | 3 | 10403 | ++ | BC050861 | 2963 | 2477 | 2534 | contig_0 | 53787 | 1380 | 11840 | 4 | 10,21,5,21, | 2477,2487,2508,2513, | 1380,1770,11454,11819, |
585 | 58 | 1 | 0 | 0 | 0 | 0 | 3 | 10401 | ++ | BC058108 | 2356 | 1879 | 1938 | contig_0 | 53787 | 1380 | 11840 | 4 | 12,21,5,21, | 1879,1891,1912,1917, | 1380,1770,11454,11819, |
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Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
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