Schema for wgEncodeGencodeAttrsV37lift37
  Database: hg19    Primary Table: wgEncodeGencodeAttrsV37lift37    Row Count: 236,066   Data last updated: 2021-03-12
On download server: MariaDB table dump directory
fieldexampleSQL type info
geneId ENSG00000223972.5_4varchar(255) values
geneName DDX11L1varchar(255) values
geneType transcribed_unprocessed_pse...varchar(255) values
geneStatus  varchar(255) values
transcriptId ENST00000456328.2_1varchar(255) values
transcriptName DDX11L1-202varchar(255) values
transcriptType processed_transcriptvarchar(255) values
transcriptStatus  varchar(255) values
havanaGeneId OTTHUMG00000000961.2_4varchar(255) values
havanaTranscriptId OTTHUMT00000362751.1_1varchar(255) values
ccdsId  varchar(255) values
level 2int(11) range
transcriptClass pseudovarchar(255) values
proteinId  varchar(255) values

Connected Tables and Joining Fields
        hg19.wgEncodeGencodeGeneSourceV37lift37.geneId (via wgEncodeGencodeAttrsV37lift37.geneId)
      hg19.wgEncodeGencodeAnnotationRemarkV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeBasicV37lift37.name (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeCompV37lift37.name (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeGeneSymbolV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodePdbV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodePseudoGeneV37lift37.name (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodePubMedV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeRefSeqV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeTagV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeTranscriptSourceV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeTranscriptSupportV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeTranscriptionSupportLevelV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)
      hg19.wgEncodeGencodeUniProtV37lift37.transcriptId (via wgEncodeGencodeAttrsV37lift37.transcriptId)

Sample Rows
 
geneIdgeneNamegeneTypegeneStatustranscriptIdtranscriptNametranscriptTypetranscriptStatushavanaGeneIdhavanaTranscriptIdccdsIdleveltranscriptClassproteinId
ENSG00000223972.5_4DDX11L1transcribed_unprocessed_pseudogeneENST00000456328.2_1DDX11L1-202processed_transcriptOTTHUMG00000000961.2_4OTTHUMT00000362751.1_12pseudo
ENSG00000223972.5_4DDX11L1transcribed_unprocessed_pseudogeneENST00000450305.2_1DDX11L1-201transcribed_unprocessed_pseudogeneOTTHUMG00000000961.2_4OTTHUMT00000002844.2_12pseudo
ENSG00000227232.5_4WASH7Punprocessed_pseudogeneENST00000488147.1_3WASH7P-201unprocessed_pseudogeneOTTHUMG00000000958.1_4OTTHUMT00000002839.1_32pseudo
ENSG00000243485.5_9MIR1302-2HGlncRNAENST00000473358.1_2MIR1302-2HG-202lncRNAOTTHUMG00000000959.2_9OTTHUMT00000002840.1_22nonCoding
ENSG00000243485.5_9MIR1302-2HGlncRNAENST00000469289.1_1MIR1302-2HG-201lncRNAOTTHUMG00000000959.2_9OTTHUMT00000002841.2_12nonCoding
ENSG00000237613.2_5FAM138AlncRNAENST00000417324.1_3FAM138A-201lncRNAOTTHUMG00000000960.1_5OTTHUMT00000002842.1_32nonCoding
ENSG00000237613.2_5FAM138AlncRNAENST00000461467.1_3FAM138A-202lncRNAOTTHUMG00000000960.1_5OTTHUMT00000002843.1_32nonCoding
ENSG00000268020.3_4OR4G4Punprocessed_pseudogeneENST00000606857.1_1OR4G4P-201unprocessed_pseudogeneOTTHUMG00000185779.1_4OTTHUMT00000471235.1_12pseudo
ENSG00000240361.2_5OR4G11Ptranscribed_unprocessed_pseudogeneENST00000642116.1_1OR4G11P-202processed_transcriptOTTHUMG00000001095.3_5OTTHUMT00000492680.1_12pseudo
ENSG00000240361.2_5OR4G11Ptranscribed_unprocessed_pseudogeneENST00000492842.2_2OR4G11P-201transcribed_unprocessed_pseudogeneOTTHUMG00000001095.3_5OTTHUMT00000003224.3_22pseudo

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.