Schema for wgEncodeGencodeExonSupportVM25
  Database: mm10    Primary Table: wgEncodeGencodeExonSupportVM25    Row Count: 7,425,405   Data last updated: 2020-04-29
Format description: GENCODE exon support from other datasets
On download server: MariaDB table dump directory
fieldexampleSQL type description
transcriptId ENSMUST00000193812.1varchar(255) GENCODE transcript identifier
seqId AK016604.1varchar(255) Identifier of sequence supporting transcript
seqSrc EMBLvarchar(255) Source of supporting sequence
exonId ENSMUSE00001343744.1varchar(255) GENCODE exon identifier (not stable)
chrom chr1varchar(255) Chromosome
chromStart 3073252int(10) unsigned Start position in chromosome
chromEnd 3074322int(10) unsigned End position in chromosome

Connected Tables and Joining Fields
        mm10.wgEncodeGencodeAttrsVM25.transcriptId (via wgEncodeGencodeExonSupportVM25.transcriptId)

Sample Rows
 
transcriptIdseqIdseqSrcexonIdchromchromStartchromEnd
ENSMUST00000193812.1AK016604.1EMBLENSMUSE00001343744.1chr130732523074322
ENSMUST00000082908.1RF00026-AAHY01003237.1/2045-2154RFAMENSMUSE00000522066.1chr131020153102125
ENSMUST00000162897.1AK220428.1EMBLENSMUSE00000858910.1chr132136083216344
ENSMUST00000162897.1AK220428.1EMBLENSMUSE00000866652.1chr132059003207317
ENSMUST00000159265.1AK135172.1EMBLENSMUSE00000863980.1chr132134383215632
ENSMUST00000159265.1AK135172.1EMBLENSMUSE00000867897.1chr132065223207317
ENSMUST00000070533.4DA708570.1EMBLENSMUSE00000485541.3chr136705513671498
ENSMUST00000070533.4AY534250.1EMBLENSMUSE00000485541.3chr136705513671498
ENSMUST00000070533.4Q5GH67.1Uniprot/SWISSPROTENSMUSE00000485541.3chr136705513671498
ENSMUST00000070533.4Q5GH67Uniprot/SWISSPROTENSMUSE00000485541.3chr136705513671498

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.