Schema for wgEncodeGencodeExonSupportVM34
  Database: mm39    Primary Table: wgEncodeGencodeExonSupportVM34    Row Count: 7,056,170   Data last updated: 2024-01-11
Format description: GENCODE exon support from other datasets
On download server: MariaDB table dump directory
fieldexampleSQL type description
transcriptId ENSMUST00000194081.2varchar(255) GENCODE transcript identifier
seqId AK038167.1varchar(255) Identifier of sequence supporting transcript
seqSrc EMBLvarchar(255) Source of supporting sequence
exonId ENSMUSE00001337335.2varchar(255) GENCODE exon identifier (not stable)
chrom chr1varchar(255) Chromosome
chromStart 108344806int(10) unsigned Start position in chromosome
chromEnd 108347562int(10) unsigned End position in chromosome

Connected Tables and Joining Fields
        mm39.wgEncodeGencodeAttrsVM34.transcriptId (via wgEncodeGencodeExonSupportVM34.transcriptId)

Sample Rows
 
transcriptIdseqIdseqSrcexonIdchromchromStartchromEnd
ENSMUST00000194081.2AK038167.1EMBLENSMUSE00001337335.2chr1108344806108347562
ENSMUST00000194393.2P23497.3Uniprot/SWISSPROTENSMUSE00001339893.2chr169807836981446
ENSMUST00000194393.2A9RA84.1Uniprot/SWISSPROTENSMUSE00001339893.2chr169807836981446
ENSMUST00000194393.2P09429.3Uniprot/SWISSPROTENSMUSE00001339893.2chr169807836981446
ENSMUST00000185509.2P70124.1Uniprot/SWISSPROTENSMUSE00001325295.2chr1108540066108540244
ENSMUST00000194605.2P62242.2Uniprot/SWISSPROTENSMUSE00001339810.2chr169867826987219
ENSMUST00000194605.2P62243.2Uniprot/SWISSPROTENSMUSE00001339810.2chr169867826987219
ENSMUST00000194605.2P62241.2Uniprot/SWISSPROTENSMUSE00001339810.2chr169867826987219
ENSMUST00000194605.2P62242.2Uniprot/SWISSPROTENSMUSE00001343179.2chr169936236993812
ENSMUST00000194605.2P62243.2Uniprot/SWISSPROTENSMUSE00001343179.2chr169936236993812

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.