Schema for hgBlastTab
  Database: sacCer3    Primary Table: hgBlastTab    Row Count: 2,361   Data last updated: 2022-07-12
Format description: Blast alignments of Human genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query YMR315Wvarchar(255) values Name of sequence in this assembly (query)
target ENST00000221403.7varchar(255) values Name of sequence in other assembly (target)
identity 27.27float range Percent identity
aliLength 242int(10) unsigned range Length of alignment
mismatch 149int(10) unsigned range Number of mismatches
gapOpen 11int(10) unsigned range Number of gap openings
qStart 3int(10) unsigned range Start in query (0 based)
qEnd 235int(10) unsigned range End in query (non-inclusive)
tStart 2int(10) unsigned range Start in target (0 based)
tEnd 227int(10) unsigned range End in target (non-inclusive)
eValue 0.0000003double range Expectation value
bitScore 54.7double range Bit score

Connected Tables and Joining Fields
        sacCer3.ceBlastTab.query (via hgBlastTab.query)
      sacCer3.choExpDistance.query (via hgBlastTab.query)
      sacCer3.choExpDistance.target (via hgBlastTab.query)
      sacCer3.dmBlastTab.query (via hgBlastTab.query)
      sacCer3.drBlastTab.query (via hgBlastTab.query)
      sacCer3.esRegGeneToModule.gene (via hgBlastTab.query)
      sacCer3.esRegGeneToMotif.gene (via hgBlastTab.query)
      sacCer3.esRegUpstreamRegion.name (via hgBlastTab.query)
      sacCer3.mmBlastTab.query (via hgBlastTab.query)
      sacCer3.rnBlastTab.query (via hgBlastTab.query)
      sacCer3.sgdBlastTab.query (via hgBlastTab.query)
      sacCer3.sgdBlastTab.target (via hgBlastTab.query)
      sacCer3.sgdCanonical.transcript (via hgBlastTab.query)
      sacCer3.sgdDescription.name (via hgBlastTab.query)
      sacCer3.sgdGene.name (via hgBlastTab.query)
      sacCer3.sgdIsoforms.transcript (via hgBlastTab.query)
      sacCer3.sgdPep.name (via hgBlastTab.query)
      sacCer3.sgdToName.name (via hgBlastTab.query)
      sacCer3.sgdToSwissProt.name (via hgBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
YMR315WENST00000221403.727.2724214911323522270.000000354.7
YMR314WENST00000396394.752.772351082023402332e-67253
YMR309CENST00000564243.530.7544328122567803218363e-60232
YHR072W-AENST00000328848.660.34582300580580.000000000000172.8
YMR308CENST00000490680.529.571045667192010281910329e-108390
YMR304WENST00000344836.930.021156606293811726710422e-121436
YMR296CENST00000262554.733.83467258883547474661e-71269
YMR292WENST00000229314.1042.64129740213131320.000000352.4
YMR293CENST00000369046.833.41437252943457674883e-53207
YMR288WENST00000335508.1153.47849393212497145513040899

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.