Schema for estOrientInfo
  Database: ailMel1    Primary Table: estOrientInfo    Row Count: 2   Data last updated: 2018-04-23
Format description: Extra information on ESTs - calculated by polyInfo program
On download server: MariaDB table dump directory
fieldexampleSQL type info description
bin 604smallint(5) unsigned range Indexing field to speed chromosome range queries.
chrom GL192437.1varchar(255) values Reference sequence chromosome or scaffold
chromStart 2583395int(10) unsigned range Start position in chromosome
chromEnd 2583743int(10) unsigned range End position in chromosome
name AF325534varchar(255) values Accession of EST
intronOrientation 0smallint(6) range Orientation of introns with respect to EST
sizePolyA 0smallint(6) range Number of trailing A's
revSizePolyA 0smallint(6) range Number of trailing A's on reverse strand
signalPos 0smallint(6) range Position of start of polyA signal relative to end of EST or 0 if no signal
revSignalPos 0smallint(6) range PolyA signal position on reverse strand if any

Connected Tables and Joining Fields
        ailMel1.all_est.qName (via estOrientInfo.name)
      hgFixed.gbCdnaInfo.acc (via estOrientInfo.name)
      hgFixed.gbSeq.acc (via estOrientInfo.name)
      hgFixed.imageClone.acc (via estOrientInfo.name)

Sample Rows
 
binchromchromStartchromEndnameintronOrientationsizePolyArevSizePolyAsignalPosrevSignalPos
604GL192437.125833952583743AF32553400000
588GL192735.1425134425875AF32570900000

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.