Schema for mmBlastTab
  Database: danRer10    Primary Table: mmBlastTab    Row Count: 13,192   Data last updated: 2018-05-18
Format description: Blast alignments of Mouse genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query ENSDART00000171137.1varchar(255) values Name of sequence in this assembly (query)
target uc008lzb.2varchar(255) values Name of sequence in other assembly (target)
identity 76.73float range Percent identity
aliLength 447int(10) unsigned range Length of alignment
mismatch 104int(10) unsigned range Number of mismatches
gapOpen 0int(10) unsigned range Number of gap openings
qStart 1int(10) unsigned range Start in query (0 based)
qEnd 448int(10) unsigned range End in query (non-inclusive)
tStart 46int(10) unsigned range Start in target (0 based)
tEnd 493int(10) unsigned range End in target (non-inclusive)
eValue 0double range Expectation value
bitScore 725double range Bit score

Connected Tables and Joining Fields
        danRer10.ensGene.name (via mmBlastTab.query)
      danRer10.ensGtp.transcript (via mmBlastTab.query)
      danRer10.ensPep.name (via mmBlastTab.query)
      danRer10.ensemblSource.name (via mmBlastTab.query)
      danRer10.ensemblToGeneName.name (via mmBlastTab.query)
      knownGeneV39.knownToEnsembl.value (via mmBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
ENSDART00000171137.1uc008lzb.276.7344710401448464930725
ENSDART00000161245.1uc008mir.264.6960621223219251047100795
ENSDART00000106388.4uc007qdw.162.21172641117221748e-59223
ENSDART00000165639.1uc057lnd.161.631371501796146095144801236
ENSDART00000092002.4uc008jeq.167.0872323410719237460988
ENSDART00000082110.4uc011yha.265.1361114318379203696e-120428
ENSDART00000151351.2uc008lki.2432001025119331995e-26115
ENSDART00000086495.4uc009dvn.176.775511271055005510876
ENSDART00000155746.2uc008viw.398.9519120019101914e-108387
ENSDART00000091901.5uc008jvc.198.982943015309153092e-167585

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.