Schema for mmBlastTab
  Database: danRer11    Primary Table: mmBlastTab    Row Count: 13,309   Data last updated: 2022-07-12
Format description: Blast alignments of Mouse genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query ENSDART00000171137.2varchar(255) values Name of sequence in this assembly (query)
target ENSMUST00000028683.14varchar(255) values Name of sequence in other assembly (target)
identity 76.73float range Percent identity
aliLength 447int(10) unsigned range Length of alignment
mismatch 104int(10) unsigned range Number of mismatches
gapOpen 0int(10) unsigned range Number of gap openings
qStart 1int(10) unsigned range Start in query (0 based)
qEnd 448int(10) unsigned range End in query (non-inclusive)
tStart 46int(10) unsigned range Start in target (0 based)
tEnd 493int(10) unsigned range End in target (non-inclusive)
eValue 0double range Expectation value
bitScore 733double range Bit score

Connected Tables and Joining Fields
        danRer11.ensGene.name (via mmBlastTab.query)
      danRer11.ensGtp.transcript (via mmBlastTab.query)
      danRer11.ensPep.name (via mmBlastTab.query)
      danRer11.ensemblSource.name (via mmBlastTab.query)
      danRer11.ensemblToGeneName.name (via mmBlastTab.query)
      danRer11.hgBlastTab.query (via mmBlastTab.query)
      knownGeneV39.knownToEnsembl.value (via mmBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
ENSDART00000171137.2ENSMUST00000028683.1476.7344710401448464930733
ENSDART00000161245.2ENSMUST00000028897.864.6960621223219251047100802
ENSDART00000190819.1ENSMUST00000074552.1237.9163331720058706031e-99362
ENSDART00000106388.5ENSMUST00000001757.962.21172641117221749e-60226
ENSDART00000066722.8ENSMUST00000116476.980.9319430432220972902e-68256
ENSDART00000082110.5ENSMUST00000146390.365.1361114318379203694e-116416
ENSDART00000086495.5ENSMUST00000032497.776.775511271055005510906
ENSDART00000185422.1ENSMUST00000038382.566.326801681417673176600734
ENSDART00000091901.6ENSMUST00000028278.1498.642954014309143096e-174607
ENSDART00000066721.6ENSMUST00000022815.1053.92821252828742845e-68255

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.