Schema for atlasOncoGene
  Database: hg16    Primary Table: atlasOncoGene    Row Count: 2,969   Data last updated: 2003-09-02
Format description: Table used to link into ATLAS Oncology site
On download server: MariaDB table dump directory
fieldexampleSQL type info description
locusSymbol 101F6varchar(40) values LocusLink Symbol
atlasGene -varchar(40) values ATLAS Gene
otherGene 101F6varchar(40) values Other gene
url Genes_gc/GC_101F6.htmlvarchar(255) values URL for corresonding ATLAS web page

Connected Tables and Joining Fields
        hg16.jaxOrtholog.humanSymbol (via atlasOncoGene.locusSymbol)
      hg16.kgAlias.alias (via atlasOncoGene.locusSymbol)
      hg16.kgXref.geneSymbol (via atlasOncoGene.locusSymbol)
      hg16.refFlat.geneName (via atlasOncoGene.locusSymbol)
      hgFixed.refLink.name (via atlasOncoGene.locusSymbol)
      visiGene.gene.name (via atlasOncoGene.locusSymbol)

Sample Rows
 
locusSymbolatlasGeneotherGeneurl
101F6-101F6Genes_gc/GC_101F6.html
AADAC-AADACGenes_gc/GC_AADAC.html
AAMP-AAMPGenes_gc/GC_AAMP.html
AATF-AATFGenes_gc/GC_AATF.html
AAVS1-AAVS1Genes_gc/GC_AAVS1.html
ABCB1PGY1ID105ABCB1Genes/PGY1ID105.html
ABCB6-ABCB6Genes_gc/GC_ABCB6.html
ABCC1MRPID106ABCC1Genes/MRPID106.html
ABCC11-ABCC11Genes_gc/GC_ABCC11.html
ABCC2-ABCC2Genes_gc/GC_ABCC2.html

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.