Schema for wgEncodeGencodePdbV47
  Database: hg38    Primary Table: wgEncodeGencodePdbV47    Row Count: 329,542   Data last updated: 2024-10-17
Format description: GENCODE transcript to Protein Data Bank (PDB) protein structure mapping
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000378391.6varchar(255) values GENCODE transcript identifier
pdbId 2N1Ivarchar(255) values Protein Data Bank (PDB) identifier

Connected Tables and Joining Fields
        hg38.wgEncodeGencodeAttrsV47.transcriptId (via wgEncodeGencodePdbV47.transcriptId)

Sample Rows
 
transcriptIdpdbId
ENST00000378391.62N1I
ENST00000378391.66BW4
ENST00000270722.102N1I
ENST00000270722.106BW4
ENST00000356607.92W84
ENST00000356607.92W85
ENST00000356607.94BXU
ENST00000328089.112JK9
ENST00000328089.113F2O
ENST00000357898.32JK9

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.