Schema for wgEncodeGencodePubMedV45
  Database: hg38    Primary Table: wgEncodeGencodePubMedV45    Row Count: 311,344   Data last updated: 2024-01-11
Format description: Gencode metadata table of PubMed identifier of published experimental data associated with Gencode Genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENST00000511072.5varchar(255) values GENCODE transcript identifier
pubMedId 11050005int(11) range PubMed identifier of supporting literature

Connected Tables and Joining Fields
        hg38.wgEncodeGencodeAttrsV45.transcriptId (via wgEncodeGencodePubMedV45.transcriptId)

Sample Rows
 
transcriptIdpubMedId
ENST00000511072.511050005
ENST00000511072.527151440
ENST00000607632.111050005
ENST00000607632.127151440
ENST00000378391.611050005
ENST00000378391.627151440
ENST00000514189.511050005
ENST00000514189.527151440
ENST00000270722.1011050005
ENST00000270722.1027151440

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.