Schema for wgEncodeGencodePdbVM33
  Database: mm39    Primary Table: wgEncodeGencodePdbVM33    Row Count: 12,833   Data last updated: 2023-07-19
Format description: GENCODE transcript to Protein Data Bank (PDB) protein structure mapping
On download server: MariaDB table dump directory
fieldexampleSQL type info description
transcriptId ENSMUST00000112701.8varchar(255) values GENCODE transcript identifier
pdbId 6CGSvarchar(255) values Protein Data Bank (PDB) identifier

Connected Tables and Joining Fields
        mm39.wgEncodeGencodeAttrsVM33.transcriptId (via wgEncodeGencodePdbVM33.transcriptId)

Sample Rows
 
transcriptIdpdbId
ENSMUST00000112701.86CGS
ENSMUST00000027542.136CGS
ENSMUST00000172005.86CGS
ENSMUST00000188952.71B0X
ENSMUST00000188952.72HEL
ENSMUST00000188952.72XYU
ENSMUST00000188952.72Y6M
ENSMUST00000188952.72Y6O
ENSMUST00000188797.71B0X
ENSMUST00000188797.72HEL

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.