Schema for ensPep
  Database: oryCun2    Primary Table: ensPep    Row Count: 41,055   Data last updated: 2021-05-25
Format description: The mRNA sequence that represents each UCSC Genes transcript.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
name ENSOCUT00000000001.4varchar(255) values Name of gene
seq MSTAGKVIRCRAAVLWKSGAPFSIEEV...longblob   mRNA sequence

Connected Tables and Joining Fields
        knownGeneV39.knownToEnsembl.value (via ensPep.name)
      oryCun2.ensGene.name (via ensPep.name)
      oryCun2.ensGtp.transcript (via ensPep.name)
      oryCun2.ensemblSource.name (via ensPep.name)
      oryCun2.ensemblToGeneName.name (via ensPep.name)

Sample Rows
 
nameseq
ENSOCUT00000000001.4MSTAGKVIRCRAAVLWKSGAPFSIEEVEVAPPKEKEVRIKIVATGLCGTEMKMLARTDLPGLYPIILGHEGAGIVESVGGGVNTVKPGDKVIILFLPQCGECSSCLNSGENYCIKLKQSKTALMSDGT ...
ENSOCUT00000000002.2MKKGAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIDINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAVLKEVQPRAQKIAEHRRKYERKRE ...
ENSOCUT00000000003.4PSEPEHPAANPPGAAPPACADSDPGASEPGLPVRRGSGSALGGPLDPQFPGPSDASLGAVPGPRVLPCGPSPQHHRALRFSYHLEGSQPRPGLHQGNRILVKSLSLDPGQSLEPHPEGPQRLRSDPGP ...
ENSOCUT00000000004.3MAGVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKG ...
ENSOCUT00000000005.4MTSLSTSAQCSASESACGISTERINQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVSLATATTDAAQTLALAQDHSM ...
ENSOCUT00000000006.3MGKSASKQFNEEVLKAHNEYRQQHGVPPLKLCKKLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNQGFFEENVLPPKK
ENSOCUT00000000007.3MSQILRELLRVSERAANIARACRQQQALFQLLIEEKKEGEKNKKFSVDFKTLADVLVQEVIKQNMENKFPGLEKNIFGEESNEFTNDLGEKITVRLCSAEEETAELLSKVLNGNQSASGALAKVVHQD ...
ENSOCUT00000000008.3MKCLQRQNPSCVSVPVCAVRVRISRTHTRRHSSAPAHSSSRNKQRKPLPWWCYSANSHQSGSQRPEIVCSPVPAGDLLPQPARSTMKLEFTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHR ...
ENSOCUT00000000009.3MAELDPFGTPAGAPGGPALGNGLAGAGEEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPEAVDGVMNGEYYQESNGPTDGYAAISQVDRLQSEPESIRKWREEQKERLEALDANS ...
ENSOCUT00000000010.4MWVPAVANLLLLSLGLLEAIQDAQLDMALDSFDDQYIGCAAATMAALPNLNLTEFKDNKLYADGWVEARQKWQERRARGPTRLPPFPAGFRDEHEMALLAYTDNSPLYREFNTAVRQGGRSRAHYCQH ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.