track assembly url http://www.ncbi.nlm.nih.gov/nuccore/$$ type bigBed 6 longLabel Assembly urlLabel NCBI Nucleotide database color 150,100,30 altColor 230,170,40 bigDataUrl ricCom1.assembly.bb priority 10 html assembly group map shortLabel Assembly visibility pack colorByStrand 150,100,30 230,170,40 track gap type bigBed 4 longLabel Gap color 0,0,0 bigDataUrl ricCom1.gap.bb priority 11 html gap group map shortLabel Gap visibility dense track gc5Base type bigWig 0 100 longLabel GC Percent in 5-Base Windows viewLimits 30:70 autoScale Off color 0,0,0 altColor 128,128,128 bigDataUrl ricCom1.gc5Base.bw priority 23.5 graphTypeDefault Bar html gc5Base gridDefault OFF group map maxHeightPixels 128:36:16 windowingFunction Mean shortLabel GC Percent visibility full track simpleRepeat type bigBed 4 + longLabel Simple Tandem Repeats by TRF bigDataUrl ricCom1.simpleRepeat.bb priority 149.3 html simpleRepeat group varRep shortLabel Simple Repeats visibility dense track genscan type bigBed 12 . longLabel Genscan Gene Predictions color 170,100,0 bigDataUrl ricCom1.genscan.bb priority 50 html genscan group genes shortLabel Genscan Genes visibility pack track cpgIslandExt type bigBed 4 + longLabel CpG Islands (Islands < 300 Bases are Light Green) color 0,100,0 altColor 128,228,128 bigDataUrl ricCom1.cpgIslandExt.bb priority 90 html cpgIslandExt group regulation shortLabel CpG Islands visibility pack track repeatMasker noInherit on type bed 3 . longLabel Repeating Elements by RepeatMasker priority 149.1 compositeTrack on html repeatMasker group varRep shortLabel RepeatMasker visibility dense track repeatMaskerRNA type bigBed 6 + longLabel RNA Repeating Elements by RepeatMasker parent repeatMasker bigDataUrl ricCom1.rmsk.RNA.bb priority 1 maxWindowToDraw 10000000 spectrum on shortLabel RNA colorByStrand 50,50,150 150,50,50 track repeatMaskerSimple type bigBed 6 + longLabel Simple Repeating Elements by RepeatMasker parent repeatMasker bigDataUrl ricCom1.rmsk.Simple.bb priority 2 maxWindowToDraw 10000000 spectrum on shortLabel Simple colorByStrand 50,50,150 150,50,50 track repeatMaskerLowComplexity type bigBed 6 + longLabel Low Complexity Repeating Elements by RepeatMasker parent repeatMasker bigDataUrl ricCom1.rmsk.LowComplexity.bb priority 3 maxWindowToDraw 10000000 spectrum on shortLabel Low Complexity colorByStrand 50,50,150 150,50,50 track repeatMaskerOther type bigBed 6 + longLabel Other Repeating Elements by RepeatMasker parent repeatMasker bigDataUrl ricCom1.rmsk.Other.bb priority 4 maxWindowToDraw 10000000 spectrum on shortLabel Other colorByStrand 50,50,150 150,50,50 track windowMasker type bigBed 3 . longLabel Genomic Intervals Masked by WindowMasker + SDust bigDataUrl ricCom1.windowMasker.bb priority 149.26 html windowMasker group varRep shortLabel WM + SDust visibility dense track lastzAraTha1 type bigBed 12 . longLabel lastz chain to araTha1 bigDataUrl lastzRicCom1ToAraTha1.bb priority 150 group compGeno shortLabel lastz araTha1 visibility dense