Manage Custom Tracks
 
genome     assembly     [hg19]

Name Description Type Doc Items Pos
Visel_Lidral_Enhancers_Aug2012Craniofacial Enhancers August 2012bed 80chr1:
Attanasio_Science_2013Craniofacial Enhancers Attanasio et al 2013bed 280chr8:
hNCCActive EnhancershNCCActive Enhancersbed 4346chr6:
Human_H3K27AcCotney Human H2K27 Enhancersbed 48chr1:
AugustEnhancersAugustEnhancersbed 80chr1:
denovosdenovosbed 136chr1:
p63motifsMcDade p63 motifsbed 7944chr1:
proxySNPs_JPTCHproxy SNPs for GWASbed 4151chr1:
proxySNPs_CEUproxy SNPs for GWASbed 4473chr1:
Mitchellp63Mitchell2012 p63 binding sitesbed 4chr21:
p63ChipSeqMcDade p63 ChipSeqbed 7574chrY:
BottiChipSeqBotti et al IRF6 ChipSeqbed 18chr1:
Beaty2010_SNPsBeaty et al 2010 SNPs p<10-5bed 187chr1:
seq_regions2GWASeq Regionsbed 13chr1:
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Managing Custom Tracks
 

This section provides a brief description of the columns in custom track management table. For more details about managing custom tracks, see the Genome Browser User's Guide.

  • Name - a hyperlink to the update page where you can edit your track data.
  • Description - the value of the "description" attribute from the track line, if present. If no description is included in the input file, this field contains the track name.
  • Type - the track type, determined by the Browser based on the format of the data.
  • Doc - displays "Y" (Yes) if a description page has been uploaded for the track; otherwise the field is blank.
  • Items - the number of data items in the custom track file. An item count is not displayed for tracks lacking individual items (e.g. wiggle format data).
  • Pos - the default chromosomal position defined by the track file in either the browser line "position" attribute or the first data line. Clicking this link opens the Genome Browser or Table Browser at the specified position (note: only the chromosome name is shown in this column). The Pos column remains blank if the track lacks individual items (e.g. wiggle format data) and the browser line "position" attribute hasn't been set.