Manage Custom Tracks
 
genome     assembly     [hg38]

Name Description Type Doc Items Pos
let7_BedGraphlet7_bdgbedGraph 305563chr1:
let7_bedlet7_bedbed 950470chr1:
qCLASH_prim_hep_9Mcells_bedqCLASH_prim_hep_9Mcells_bedbed 853chr1:
qCLASH_prim_hep_9Mcells_BedGraphqCLASH_prim_hep_9Mcells_bdgbedGraph 467chr1:
qCLASH_prim_hep_23Mcells_bedqCLASH_prim_hep_23Mcells_bedbed 1999chr1:
qCLASH_prim_hep_23Mcells_BedGraphqCLASH_prim_hep_23Mcells_bdgbedGraph 963chr1:
qCLASH_prim_hep_32Mcells_bedqCLASH_prim_hep_32Mcells_bedbed 4515chr1:
qCLASH_prim_hep_32Mcells_BedGraphqCLASH_prim_hep_32Mcells_bdgbedGraph 2110chr1:
mir192_BedGraphmir192_bdgbedGraph 55chr1:
mir192_bedmir192_bedbed 271chr1:
mir34a_BedGraphmir34a_bdgbedGraph 4639chr1:
mir1275_BedGraphmir1275_bdgbedGraph 9361chr1:
mir148a_BedGraphmir148a_bdgbedGraph 10638chr1:
mir27b_BedGraphmir27b_bdgbedGraph 12536chr1:
mir320a_BedGraphmir320a_bdgbedGraph 4813chr1:
mir125b_BedGraphmir125b_bdgbedGraph 7034chr1:
mir122_BedGraphmir122_bdgbedGraph 87032chr1:
qCLASH_hela_bedqCLASH_hela_bedbed 47006chr1:
qCLASH_hela_BedGraphqCLASH_hela_bdgbedGraph 31641chr1:
mir34a_bedmir34a_bedbed 6185chr1:
mir1275_bedmir1275_bedbed 11070chr1:
mir148a_bedmir148a_bedbed 15137chr1:
mir27b_bedmir27b_bedbed 35790chr1:
mir320a_bedmir320a_bedbed 75856chr1:
mir125b_bedmir125b_bedbed 138054chr1:
mir122_bedmir122_bedbed 168646chr1:
hepG2_kit1_BedGraphhepG2_kit1_bdgbedGraph 297941chr1:
hepG2_kit1_bedhepG2_kit1_bedbed 297657chr1:
eCLIPSE_run1_BedGrapheCLIPSE_run1_bdgbedGraph 167749chr1:
eCLIPSE_run2_BedGrapheCLIPSE_run2_bdgbedGraph 125960chr1:
eCLIPSE_run1_bedeCLIPSE_run1_bedbed 222296chr7:
eCLIPSE_run2_bedeCLIPSE_run2_bedbed 160516chr1:
Previously studied PXR binding regionsPreviously studied PXR binding regionsencodePeak    
RIF narrowPeakRIF narrowPeakencodePeak    
DMSO narrowPeakDMSO narrowPeakencodePeak    
check all / clear all 

Managing Custom Tracks
 

This section provides a brief description of the columns in custom track management table. For more details about managing custom tracks, see the Genome Browser User's Guide.

  • Name - a hyperlink to the update page where you can edit your track data.
  • Description - the value of the "description" attribute from the track line, if present. If no description is included in the input file, this field contains the track name.
  • Type - the track type, determined by the Browser based on the format of the data.
  • Doc - displays "Y" (Yes) if a description page has been uploaded for the track; otherwise the field is blank.
  • Items - the number of data items in the custom track file. An item count is not displayed for tracks lacking individual items (e.g. wiggle format data).
  • Pos - the default chromosomal position defined by the track file in either the browser line "position" attribute or the first data line. Clicking this link opens the Genome Browser or Table Browser at the specified position (note: only the chromosome name is shown in this column). The Pos column remains blank if the track lacks individual items (e.g. wiggle format data) and the browser line "position" attribute hasn't been set.