Schema for drBlastTab
  Database: ce6    Primary Table: drBlastTab    Row Count: 4,962   Data last updated: 2013-10-11
Format description: Blast alignments of Zebrafish genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query C42D4.8varchar(255) values Name of sequence in this assembly (query)
target ENSDART00000105273varchar(255) values Name of sequence in other assembly (target)
identity 56.49float range Percent identity
aliLength 1395int(10) unsigned range Length of alignment
mismatch 571int(10) unsigned range Number of mismatches
gapOpen 14int(10) unsigned range Number of gap openings
qStart 0int(10) unsigned range Start in query (0 based)
qEnd 1384int(10) unsigned range End in query (non-inclusive)
tStart 0int(10) unsigned range Start in target (0 based)
tEnd 1370int(10) unsigned range End in target (non-inclusive)
eValue 0double range Expectation value
bitScore 1451double range Bit score

Connected Tables and Joining Fields
        ce6.dmBlastTab.query (via drBlastTab.query)
      ce6.hgBlastTab.query (via drBlastTab.query)
      ce6.kimExpDistance.query (via drBlastTab.query)
      ce6.kimExpDistance.target (via drBlastTab.query)
      ce6.mmBlastTab.query (via drBlastTab.query)
      ce6.orfToGene.name (via drBlastTab.query)
      ce6.rnBlastTab.query (via drBlastTab.query)
      ce6.sangerBlastTab.query (via drBlastTab.query)
      ce6.sangerBlastTab.target (via drBlastTab.query)
      ce6.sangerCanonical.transcript (via drBlastTab.query)
      ce6.sangerGene.name (via drBlastTab.query)
      ce6.sangerGeneToWBGeneID.sangerGene (via drBlastTab.query)
      ce6.sangerIsoforms.transcript (via drBlastTab.query)
      ce6.sangerLinks.orfName (via drBlastTab.query)
      ce6.sangerPep.name (via drBlastTab.query)
      ce6.sangerToRefSeq.name (via drBlastTab.query)
      ce6.scBlastTab.query (via drBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
C42D4.8ENSDART0000010527356.49139557114013840137001451
T21H3.3ENSDART0000010153397.9914930014901492e-79291
F38A6.2ENSDART0000001726831.09669417162358901938329e-88322
F28C1.3aENSDART0000011370237.3654628112765851907123e-85314
F23H12.2ENSDART0000002845040.4413674123159171461e-23106
F23H11.3ENSDART0000007460977.3629667021317203162e-106382
C02H7.3bENSDART0000004720841.3866728912358416523e-134477
F38A1.8ENSDART0000008682348.7865829313062406481e-142504
T26C5.3cENSDART0000012232149.35539249827565195357e-114408
Y71H2B.10cENSDART0000013712867.2684622590824081601009

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.