Schema for bdgpBlastTab
  Database: dm1    Primary Table: bdgpBlastTab    Row Count: 1,161,500   Data last updated: 2005-01-08
Format description: Blast alignments of Mouse genes
On download server: MariaDB table dump directory
fieldexampleSQL type description
query CG11023-RAvarchar(255) Name of sequence in this assembly (query)
target CG11023-RAvarchar(255) Name of sequence in other assembly (target)
identity 100float Percent identity
aliLength 468int(10) unsigned Length of alignment
mismatch 0int(10) unsigned Number of mismatches
gapOpen 0int(10) unsigned Number of gap openings
qStart 0int(10) unsigned Start in query (0 based)
qEnd 468int(10) unsigned End in query (non-inclusive)
tStart 0int(10) unsigned Start in target (0 based)
tEnd 468int(10) unsigned End in target (non-inclusive)
eValue 0double Expectation value
bitScore 945.3double Bit score

Connected Tables and Joining Fields
        dm1.arbExpDistance.query (via bdgpBlastTab.query)
      dm1.arbExpDistance.target (via bdgpBlastTab.query)
      dm1.bdgpCanonical.transcript (via bdgpBlastTab.query)
      dm1.bdgpGene.name (via bdgpBlastTab.query)
      dm1.bdgpGenePep.name (via bdgpBlastTab.query)
      dm1.bdgpIsoforms.transcript (via bdgpBlastTab.query)
      dm1.bdgpSwissProt.bdgpName (via bdgpBlastTab.query)
      dm1.bdgpToCanonical.name (via bdgpBlastTab.query)
      dm1.bdgpToLocusLink.name (via bdgpBlastTab.query)
      dm1.bdgpToPfam.name (via bdgpBlastTab.query)
      dm1.bdgpToRefSeq.name (via bdgpBlastTab.query)
      dm1.blastFBPep00.name (via bdgpBlastTab.query)
      dm1.drBlastTab.query (via bdgpBlastTab.query)
      dm1.fbTranscript.transcriptId (via bdgpBlastTab.query)
      dm1.hgBlastTab.query (via bdgpBlastTab.query)
      dm1.pscreen.geneIds (via bdgpBlastTab.query)
      dm1.scBlastTab.query (via bdgpBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
CG11023-RACG11023-RA10046800046804680945.3
CG11023-RACG12359-RA60.563551312113468116515113.9999999999999997e-122434.9
CG11023-RACG12359-RA68.18132362013293110577.200000000000001e-44174.9
CG11023-RACG32110-RA43.793381675136468884093.4e-70262.3
CG11023-RACG12717-RA25.2421010382734373805820.0000001154.68
CG11023-RACG10107-RC33.33111494273366132614300.0000001454.3
CG11023-RACG10107-RB33.331114942733662043080.0000001454.3
CG11023-RACG10107-RA33.33111494273366132614300.0000001454.3
CG2671-RACG2671-RC100116100011610116102181.4
CG2671-RACG2671-RA100116100011610116102181.4

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.