Schema for drBlastTab
  Database: dm1    Primary Table: drBlastTab    Row Count: 13,659   Data last updated: 2005-01-08
Format description: Blast alignments of Zebrafish genes
On download server: MariaDB table dump directory
fieldexampleSQL type info description
query CG11023-RAvarchar(255) values Name of sequence in this assembly (query)
target ENSDARP00000021439varchar(255) values Name of sequence in other assembly (target)
identity 41.16float range Percent identity
aliLength 294int(10) unsigned range Length of alignment
mismatch 165int(10) unsigned range Number of mismatches
gapOpen 6int(10) unsigned range Number of gap openings
qStart 178int(10) unsigned range Start in query (0 based)
qEnd 468int(10) unsigned range End in query (non-inclusive)
tStart 437int(10) unsigned range Start in target (0 based)
tEnd 727int(10) unsigned range End in target (non-inclusive)
eValue 1.4e-53double range Expectation value
bitScore 207.6double range Bit score

Connected Tables and Joining Fields
        dm1.arbExpDistance.query (via drBlastTab.query)
      dm1.arbExpDistance.target (via drBlastTab.query)
      dm1.bdgpBlastTab.query (via drBlastTab.query)
      dm1.bdgpBlastTab.target (via drBlastTab.query)
      dm1.bdgpCanonical.transcript (via drBlastTab.query)
      dm1.bdgpGene.name (via drBlastTab.query)
      dm1.bdgpGenePep.name (via drBlastTab.query)
      dm1.bdgpIsoforms.transcript (via drBlastTab.query)
      dm1.bdgpSwissProt.bdgpName (via drBlastTab.query)
      dm1.bdgpToCanonical.name (via drBlastTab.query)
      dm1.bdgpToLocusLink.name (via drBlastTab.query)
      dm1.bdgpToPfam.name (via drBlastTab.query)
      dm1.bdgpToRefSeq.name (via drBlastTab.query)
      dm1.blastFBPep00.name (via drBlastTab.query)
      dm1.fbTranscript.transcriptId (via drBlastTab.query)
      dm1.hgBlastTab.query (via drBlastTab.query)
      dm1.pscreen.geneIds (via drBlastTab.query)
      dm1.scBlastTab.query (via drBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
CG11023-RAENSDARP0000002143941.1629416561784684377271.4e-53207.6
CG2671-RAENSDARP0000003019235.45101052823197009271e-157554.7
CG2671-RBENSDARP0000003019235.12100852623196209273e-153540.4
CG2671-RCENSDARP0000003019235.45101052823197009271e-157554.7
CG2671-RDENSDARP0000003559335.03962503220921229035e-144509.6
CG2671-REENSDARP0000003559335.03962503220921229035e-144509.6
CG2671-RFENSDARP0000003559335.03962503220921229035e-144509.6
CG2657-RAENSDARP0000001575624.731861074124288482230.0000002454.3
CG31973-RAENSDARP0000000541538.7849300541033754240.00002748.52
CG31973-RBENSDARP0000001791828.57846004883864700.0000250.45

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.