Schema for ucscScop
  Database: mm9    Primary Table: ucscScop    Row Count: 62,369   Data last updated: 2011-03-03
Format description: SCOP domain
On download server: MariaDB table dump directory
fieldexampleSQL type info description
ucscId uc007aew.1varchar(255) values UCSC gene id
start 29int(11) range start offset of domain in sequence
end 138int(11) range end offset of domain in sequence
domainName d.15.11varchar(255) values domain name

Connected Tables and Joining Fields
        knownGeneV39.scopDesc.name (via ucscScop.domainName)
      knownGeneV39.ucscScop.domainName (via ucscScop.domainName)
      mm9.scopDesc.name (via ucscScop.domainName)
      knownGeneV39.bioCycPathway.kgID (via ucscScop.ucscId)
      knownGeneV39.ceBlastTab.query (via ucscScop.ucscId)
      knownGeneV39.dmBlastTab.query (via ucscScop.ucscId)
      knownGeneV39.drBlastTab.query (via ucscScop.ucscId)
      knownGeneV39.foldUtr3.name (via ucscScop.ucscId)
      knownGeneV39.foldUtr5.name (via ucscScop.ucscId)
      knownGeneV39.gnfAtlas2Distance.query (via ucscScop.ucscId)
      knownGeneV39.gnfAtlas2Distance.target (via ucscScop.ucscId)
      knownGeneV39.kgAlias.kgID (via ucscScop.ucscId)
      knownGeneV39.kgColor.kgID (via ucscScop.ucscId)
      knownGeneV39.kgProtAlias.kgID (via ucscScop.ucscId)
      knownGeneV39.kgSpAlias.kgID (via ucscScop.ucscId)
      knownGeneV39.kgTargetAli.qName (via ucscScop.ucscId)
      knownGeneV39.kgXref.kgID (via ucscScop.ucscId)
      knownGeneV39.knownAttrs.kgID (via ucscScop.ucscId)
      knownGeneV39.knownBlastTab.query (via ucscScop.ucscId)
      knownGeneV39.knownBlastTab.target (via ucscScop.ucscId)
      knownGeneV39.knownCanonical.protein (via ucscScop.ucscId)
      knownGeneV39.knownCanonical.transcript (via ucscScop.ucscId)
      knownGeneV39.knownCds.name (via ucscScop.ucscId)
      knownGeneV39.knownGene.name (via ucscScop.ucscId)
      knownGeneV39.knownGeneMrna.name (via ucscScop.ucscId)
      knownGeneV39.knownGenePep.name (via ucscScop.ucscId)
      knownGeneV39.knownIsoforms.transcript (via ucscScop.ucscId)
      knownGeneV39.knownToEnsembl.name (via ucscScop.ucscId)
      knownGeneV39.knownToGnfAtlas2.name (via ucscScop.ucscId)
      knownGeneV39.knownToHprd.name (via ucscScop.ucscId)
      knownGeneV39.knownToLocusLink.name (via ucscScop.ucscId)
      knownGeneV39.knownToMrna.name (via ucscScop.ucscId)
      knownGeneV39.knownToMrnaSingle.name (via ucscScop.ucscId)
      knownGeneV39.knownToMupit.name (via ucscScop.ucscId)
      knownGeneV39.knownToPfam.name (via ucscScop.ucscId)
      knownGeneV39.knownToRefSeq.name (via ucscScop.ucscId)
      knownGeneV39.knownToSuper.gene (via ucscScop.ucscId)
      knownGeneV39.knownToTag.name (via ucscScop.ucscId)
      knownGeneV39.knownToU133.name (via ucscScop.ucscId)
      knownGeneV39.knownToU95.name (via ucscScop.ucscId)
      knownGeneV39.knownToVisiGene.name (via ucscScop.ucscId)
      knownGeneV39.knownToWikipedia.name (via ucscScop.ucscId)
      knownGeneV39.mmBlastTab.query (via ucscScop.ucscId)
      knownGeneV39.rnBlastTab.query (via ucscScop.ucscId)
      knownGeneV39.scBlastTab.query (via ucscScop.ucscId)
      knownGeneV39.ucscScop.ucscId (via ucscScop.ucscId)
      mm9.affyGnfU74ADistance.query (via ucscScop.ucscId)
      mm9.affyGnfU74ADistance.target (via ucscScop.ucscId)
      mm9.affyGnfU74BDistance.query (via ucscScop.ucscId)
      mm9.affyGnfU74BDistance.target (via ucscScop.ucscId)
      mm9.affyGnfU74CDistance.query (via ucscScop.ucscId)
      mm9.affyGnfU74CDistance.target (via ucscScop.ucscId)
      mm9.bioCycPathway.kgID (via ucscScop.ucscId)
      mm9.ccdsKgMap.geneId (via ucscScop.ucscId)
      mm9.ceBlastTab.query (via ucscScop.ucscId)
      mm9.dmBlastTab.query (via ucscScop.ucscId)
      mm9.drBlastTab.query (via ucscScop.ucscId)
      mm9.foldUtr3.name (via ucscScop.ucscId)
      mm9.foldUtr5.name (via ucscScop.ucscId)
      mm9.gnfAtlas2Distance.query (via ucscScop.ucscId)
      mm9.gnfAtlas2Distance.target (via ucscScop.ucscId)
      mm9.hgBlastTab.query (via ucscScop.ucscId)
      mm9.keggPathway.kgID (via ucscScop.ucscId)
      mm9.kgAlias.kgID (via ucscScop.ucscId)
      mm9.kgColor.kgID (via ucscScop.ucscId)
      mm9.kgProtAlias.kgID (via ucscScop.ucscId)
      mm9.kgProtMap2.qName (via ucscScop.ucscId)
      mm9.kgSpAlias.kgID (via ucscScop.ucscId)
      mm9.kgTargetAli.qName (via ucscScop.ucscId)
      mm9.kgTxInfo.name (via ucscScop.ucscId)
      mm9.kgXref.kgID (via ucscScop.ucscId)
      mm9.knownBlastTab.query (via ucscScop.ucscId)
      mm9.knownBlastTab.target (via ucscScop.ucscId)
      mm9.knownCanonical.protein (via ucscScop.ucscId)
      mm9.knownCanonical.transcript (via ucscScop.ucscId)
      mm9.knownGene.name (via ucscScop.ucscId)
      mm9.knownGeneMrna.name (via ucscScop.ucscId)
      mm9.knownGenePep.name (via ucscScop.ucscId)
      mm9.knownIsoforms.transcript (via ucscScop.ucscId)
      mm9.knownToAllenBrain.name (via ucscScop.ucscId)
      mm9.knownToEnsembl.name (via ucscScop.ucscId)
      mm9.knownToGnfAtlas2.name (via ucscScop.ucscId)
      mm9.knownToKeggEntrez.name (via ucscScop.ucscId)
      mm9.knownToLocusLink.name (via ucscScop.ucscId)
      mm9.knownToPfam.name (via ucscScop.ucscId)
      mm9.knownToRefSeq.name (via ucscScop.ucscId)
      mm9.knownToSuper.gene (via ucscScop.ucscId)
      mm9.knownToVisiGene.name (via ucscScop.ucscId)
      mm9.rnBlastTab.query (via ucscScop.ucscId)
      mm9.scBlastTab.query (via ucscScop.ucscId)

Sample Rows
 
ucscIdstartenddomainName
uc007aew.129138d.15.11
uc007aew.1151257d.15.11
uc007aex.219128d.15.11
uc007aex.2141247d.15.11
uc007aey.147162a.21.1
uc007aez.147162a.21.1
uc007afa.13797a.21.1
uc007afc.147162a.21.1
uc007aff.230184c.12.1
uc007afd.230184c.12.1

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.