Schema for humanWankerP2P
  Database: hg38    Primary Table: humanWankerP2P    Row Count: 601,480   Data last updated: 2024-08-19
Format description: Abstract distance between two genes
On download server: MariaDB table dump directory
fieldexampleSQL type description
query ENST00000395825.4varchar(255) Query gene. Indexed
target ENST00000395825.4varchar(255) Target gene. Not indexed
distance 0float Distance between two, possibly in some expression space

Connected Tables and Joining Fields
        hg38.bioCycPathway.kgID (via humanWankerP2P.query)
      hg38.ccdsKgMap.geneId (via humanWankerP2P.query)
      hg38.ceBlastTab.query (via humanWankerP2P.query)
      hg38.dmBlastTab.query (via humanWankerP2P.query)
      hg38.drBlastTab.query (via humanWankerP2P.query)
      hg38.foldUtr3.name (via humanWankerP2P.query)
      hg38.foldUtr5.name (via humanWankerP2P.query)
      hg38.gnfAtlas2Distance.query (via humanWankerP2P.query)
      hg38.gnfAtlas2Distance.target (via humanWankerP2P.query)
      hg38.gnfU95Distance.query (via humanWankerP2P.query)
      hg38.gnfU95Distance.target (via humanWankerP2P.query)
      hg38.humanHprdP2P.query (via humanWankerP2P.query)
      hg38.humanHprdP2P.target (via humanWankerP2P.query)
      hg38.humanVidalP2P.query (via humanWankerP2P.query)
      hg38.humanVidalP2P.target (via humanWankerP2P.query)
      hg38.keggPathway.kgID (via humanWankerP2P.query)
      hg38.kgAlias.kgID (via humanWankerP2P.query)
      hg38.kgColor.kgID (via humanWankerP2P.query)
      hg38.kgProtAlias.kgID (via humanWankerP2P.query)
      hg38.kgSpAlias.kgID (via humanWankerP2P.query)
      hg38.kgTargetAli.qName (via humanWankerP2P.query)
      hg38.kgXref.kgID (via humanWankerP2P.query)
      hg38.knownAttrs.kgID (via humanWankerP2P.query)
      hg38.knownBlastTab.query (via humanWankerP2P.query)
      hg38.knownBlastTab.target (via humanWankerP2P.query)
      hg38.knownCanonical.transcript (via humanWankerP2P.query)
      hg38.knownCds.name (via humanWankerP2P.query)
      hg38.knownGene.name (via humanWankerP2P.query)
      hg38.knownGeneMrna.name (via humanWankerP2P.query)
      hg38.knownGenePep.name (via humanWankerP2P.query)
      hg38.knownIsoforms.transcript (via humanWankerP2P.query)
      hg38.knownToEnsembl.name (via humanWankerP2P.query)
      hg38.knownToGnfAtlas2.name (via humanWankerP2P.query)
      hg38.knownToHprd.name (via humanWankerP2P.query)
      hg38.knownToKeggEntrez.name (via humanWankerP2P.query)
      hg38.knownToLocusLink.name (via humanWankerP2P.query)
      hg38.knownToLynx.name (via humanWankerP2P.query)
      hg38.knownToMrna.name (via humanWankerP2P.query)
      hg38.knownToMrnaSingle.name (via humanWankerP2P.query)
      hg38.knownToMupit.name (via humanWankerP2P.query)
      hg38.knownToNextProt.name (via humanWankerP2P.query)
      hg38.knownToPfam.name (via humanWankerP2P.query)
      hg38.knownToRefSeq.name (via humanWankerP2P.query)
      hg38.knownToSuper.gene (via humanWankerP2P.query)
      hg38.knownToTag.name (via humanWankerP2P.query)
      hg38.knownToU133.name (via humanWankerP2P.query)
      hg38.knownToU95.name (via humanWankerP2P.query)
      hg38.knownToVisiGene.name (via humanWankerP2P.query)
      hg38.knownToWikipedia.name (via humanWankerP2P.query)
      hg38.mmBlastTab.query (via humanWankerP2P.query)
      hg38.rnBlastTab.query (via humanWankerP2P.query)
      hg38.scBlastTab.query (via humanWankerP2P.query)
      hg38.ucscScop.ucscId (via humanWankerP2P.query)
      knownGeneV39.bioCycPathway.kgID (via humanWankerP2P.query)
      knownGeneV39.ceBlastTab.query (via humanWankerP2P.query)
      knownGeneV39.dmBlastTab.query (via humanWankerP2P.query)
      knownGeneV39.drBlastTab.query (via humanWankerP2P.query)
      knownGeneV39.foldUtr3.name (via humanWankerP2P.query)
      knownGeneV39.foldUtr5.name (via humanWankerP2P.query)
      knownGeneV39.gnfAtlas2Distance.query (via humanWankerP2P.query)
      knownGeneV39.gnfAtlas2Distance.target (via humanWankerP2P.query)
      knownGeneV39.kgAlias.kgID (via humanWankerP2P.query)
      knownGeneV39.kgColor.kgID (via humanWankerP2P.query)
      knownGeneV39.kgProtAlias.kgID (via humanWankerP2P.query)
      knownGeneV39.kgSpAlias.kgID (via humanWankerP2P.query)
      knownGeneV39.kgTargetAli.qName (via humanWankerP2P.query)
      knownGeneV39.kgXref.kgID (via humanWankerP2P.query)
      knownGeneV39.knownAttrs.kgID (via humanWankerP2P.query)
      knownGeneV39.knownBlastTab.query (via humanWankerP2P.query)
      knownGeneV39.knownBlastTab.target (via humanWankerP2P.query)
      knownGeneV39.knownCanonical.protein (via humanWankerP2P.query)
      knownGeneV39.knownCanonical.transcript (via humanWankerP2P.query)
      knownGeneV39.knownCds.name (via humanWankerP2P.query)
      knownGeneV39.knownGene.name (via humanWankerP2P.query)
      knownGeneV39.knownGeneMrna.name (via humanWankerP2P.query)
      knownGeneV39.knownGenePep.name (via humanWankerP2P.query)
      knownGeneV39.knownIsoforms.transcript (via humanWankerP2P.query)
      knownGeneV39.knownToEnsembl.name (via humanWankerP2P.query)
      knownGeneV39.knownToGnfAtlas2.name (via humanWankerP2P.query)
      knownGeneV39.knownToHprd.name (via humanWankerP2P.query)
      knownGeneV39.knownToLocusLink.name (via humanWankerP2P.query)
      knownGeneV39.knownToMrna.name (via humanWankerP2P.query)
      knownGeneV39.knownToMrnaSingle.name (via humanWankerP2P.query)
      knownGeneV39.knownToMupit.name (via humanWankerP2P.query)
      knownGeneV39.knownToPfam.name (via humanWankerP2P.query)
      knownGeneV39.knownToRefSeq.name (via humanWankerP2P.query)
      knownGeneV39.knownToSuper.gene (via humanWankerP2P.query)
      knownGeneV39.knownToTag.name (via humanWankerP2P.query)
      knownGeneV39.knownToU133.name (via humanWankerP2P.query)
      knownGeneV39.knownToU95.name (via humanWankerP2P.query)
      knownGeneV39.knownToVisiGene.name (via humanWankerP2P.query)
      knownGeneV39.knownToWikipedia.name (via humanWankerP2P.query)
      knownGeneV39.mmBlastTab.query (via humanWankerP2P.query)
      knownGeneV39.rnBlastTab.query (via humanWankerP2P.query)
      knownGeneV39.scBlastTab.query (via humanWankerP2P.query)
      knownGeneV39.ucscScop.ucscId (via humanWankerP2P.query)

Sample Rows
 
querytargetdistance
ENST00000395825.4ENST00000395825.40
ENST00000395825.4ENST00000564494.11
ENST00000395825.4ENST00000260403.71
ENST00000395825.4ENST00000395266.52
ENST00000395825.4ENST00000262462.92
ENST00000395825.4ENST00000456013.52
ENST00000395825.4ENST00000399448.52
ENST00000395825.4ENST00000318974.142
ENST00000395825.4ENST00000324460.72
ENST00000395825.4ENST00000552789.52

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.