Human Gene ADIPOR1 (ENST00000340990.10_7) from GENCODE V47lift37
  Description: adiponectin receptor 1, transcript variant 1 (from RefSeq NM_015999.6)
Gencode Transcript: ENST00000340990.10_7
Gencode Gene: ENSG00000159346.13_10
Transcript (Including UTRs)
   Position: hg19 chr1:202,909,960-202,927,440 Size: 17,481 Total Exon Count: 8 Strand: -
Coding Region
   Position: hg19 chr1:202,910,701-202,920,198 Size: 9,498 Coding Exon Count: 7 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:202,909,960-202,927,440)mRNA (may differ from genome)Protein (375 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: ADR1_HUMAN
DESCRIPTION: RecName: Full=Adiponectin receptor protein 1; AltName: Full=Progestin and adipoQ receptor family member I;
FUNCTION: Receptor for globular and full-length adiponectin (APM1), an essential hormone secreted by adipocytes that acts as an antidiabetic. Probably involved in metabolic pathways that regulate lipid metabolism such as fatty acid oxidation. Mediates increased AMPK, PPARA ligand activity, fatty acid oxidation and glucose uptake by adiponectin. Has some high-affinity receptor for globular adiponectin but low-affinity receptor for full-length adiponectin.
SUBUNIT: May form homomultimer and heteromultimers.
INTERACTION: Self; NbExp=3; IntAct=EBI-1632076, EBI-1632076; Q9UKG1:APPL1; NbExp=6; IntAct=EBI-1632076, EBI-741243;
SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein. Note=Localized to the cell membrane and intracellular organelles.
TISSUE SPECIFICITY: Widely expressed. Highly expressed in skeletal muscle. Expressed at intermediate level in brain, heart, spleen, kidney, liver, placenta, lung and peripheral blood leukocytes. Weakly expressed in colon, thymus and small intestine.
DOMAIN: The N-terminus is known to be cytoplasmic while the C- terminus is known to be extracellular.
SIMILARITY: Belongs to the ADIPOR family.
SEQUENCE CAUTION: Sequence=AAD34040.1; Type=Frameshift; Positions=369;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: ADIPOR1
Diseases sorted by gene-association score: fatty liver disease (9), gestational diabetes (7), barrett's adenocarcinoma (7), obesity (2), diabetes mellitus, noninsulin-dependent (1), retinitis pigmentosa (0)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 231.25 RPKM in Whole Blood
Total median expression: 2158.23 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -104.60222-0.471 Picture PostScript Text
3' UTR -197.70741-0.267 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR004254 - HlyIII-related

Pfam Domains:
PF03006 - Haemolysin-III related

ModBase Predicted Comparative 3D Structure on Q96A54
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGDEnsembl   
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0019901 protein kinase binding
GO:0038023 signaling receptor activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
GO:0046982 protein heterodimerization activity
GO:0055100 adiponectin binding
GO:0097003 adipokinetic hormone receptor activity

Biological Process:
GO:0006629 lipid metabolic process
GO:0006631 fatty acid metabolic process
GO:0009755 hormone-mediated signaling pathway
GO:0010633 negative regulation of epithelial cell migration
GO:0010719 negative regulation of epithelial to mesenchymal transition
GO:0010906 regulation of glucose metabolic process
GO:0019216 regulation of lipid metabolic process
GO:0019395 fatty acid oxidation
GO:0030308 negative regulation of cell growth
GO:0033210 leptin-mediated signaling pathway
GO:0033211 adiponectin-activated signaling pathway
GO:0042304 regulation of fatty acid biosynthetic process
GO:0042593 glucose homeostasis
GO:0046426 negative regulation of JAK-STAT cascade
GO:0046427 positive regulation of JAK-STAT cascade
GO:0046628 positive regulation of insulin receptor signaling pathway
GO:1901223 negative regulation of NIK/NF-kappaB signaling

Cellular Component:
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0031226 intrinsic component of plasma membrane


-  Descriptions from all associated GenBank mRNAs
  LF205361 - JP 2014500723-A/12864: Polycomb-Associated Non-Coding RNAs.
BC010743 - Homo sapiens adiponectin receptor 1, mRNA (cDNA clone MGC:17762 IMAGE:3878067), complete cds.
AK124455 - Homo sapiens cDNA FLJ42464 fis, clone BRACE2029644, highly similar to Homo sapiens CGI-45 protein (CGI-45).
AK222503 - Homo sapiens mRNA for adiponectin receptor 1 variant, clone: adSE00650.
BC001594 - Homo sapiens adiponectin receptor 1, mRNA (cDNA clone MGC:710 IMAGE:2988737), complete cds.
AF125179 - Homo sapiens TESBP1A mRNA, complete cds.
LF319620 - JP 2014500723-A/127123: Polycomb-Associated Non-Coding RNAs.
AF151803 - Homo sapiens CGI-45 protein mRNA, complete cds.
AK001484 - Homo sapiens cDNA FLJ10622 fis, clone NT2RP2005509, highly similar to Adiponectin receptor protein 1.
JD434179 - Sequence 415203 from Patent EP1572962.
JD435883 - Sequence 416907 from Patent EP1572962.
LF319619 - JP 2014500723-A/127122: Polycomb-Associated Non-Coding RNAs.
JD434192 - Sequence 415216 from Patent EP1572962.
JD558639 - Sequence 539663 from Patent EP1572962.
JD272250 - Sequence 253274 from Patent EP1572962.
JD551465 - Sequence 532489 from Patent EP1572962.
AK058114 - Homo sapiens cDNA FLJ25385 fis, clone TST02301.
AY424279 - Homo sapiens progestin and adipoQ receptor family member I (PAQR1) mRNA, complete cds.
HQ448254 - Synthetic construct Homo sapiens clone IMAGE:100071655; CCSB003072_01 adiponectin receptor 1 (ADIPOR1) gene, encodes complete protein.
KJ893808 - Synthetic construct Homo sapiens clone ccsbBroadEn_03202 ADIPOR1 gene, encodes complete protein.
AF125180 - Homo sapiens TESBP1B mRNA, complete cds.
CU679813 - Synthetic construct Homo sapiens gateway clone IMAGE:100017127 5' read ADIPOR1 mRNA.
LF319616 - JP 2014500723-A/127119: Polycomb-Associated Non-Coding RNAs.
LF319615 - JP 2014500723-A/127118: Polycomb-Associated Non-Coding RNAs.
LF319614 - JP 2014500723-A/127117: Polycomb-Associated Non-Coding RNAs.
LF319613 - JP 2014500723-A/127116: Polycomb-Associated Non-Coding RNAs.
LF319612 - JP 2014500723-A/127115: Polycomb-Associated Non-Coding RNAs.
LF319611 - JP 2014500723-A/127114: Polycomb-Associated Non-Coding RNAs.
JD104048 - Sequence 85072 from Patent EP1572962.
JD291710 - Sequence 272734 from Patent EP1572962.
LF319609 - JP 2014500723-A/127112: Polycomb-Associated Non-Coding RNAs.
JD142353 - Sequence 123377 from Patent EP1572962.
MA440938 - JP 2018138019-A/12864: Polycomb-Associated Non-Coding RNAs.
MA555197 - JP 2018138019-A/127123: Polycomb-Associated Non-Coding RNAs.
MA555196 - JP 2018138019-A/127122: Polycomb-Associated Non-Coding RNAs.
MA555193 - JP 2018138019-A/127119: Polycomb-Associated Non-Coding RNAs.
MA555192 - JP 2018138019-A/127118: Polycomb-Associated Non-Coding RNAs.
MA555191 - JP 2018138019-A/127117: Polycomb-Associated Non-Coding RNAs.
MA555190 - JP 2018138019-A/127116: Polycomb-Associated Non-Coding RNAs.
MA555189 - JP 2018138019-A/127115: Polycomb-Associated Non-Coding RNAs.
MA555188 - JP 2018138019-A/127114: Polycomb-Associated Non-Coding RNAs.
MA555186 - JP 2018138019-A/127112: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q96A54 (Reactome details) participates in the following event(s):

R-HSA-8848663 ADIPOQ trimer binds ADIPOR dimers
R-HSA-163680 AMPK inhibits chREBP transcriptional activation activity
R-HSA-163685 Energy Metabolism
R-HSA-1430728 Metabolism

-  Other Names for This Gene
  Alternate Gene Symbols: ADIPOR1 , B3KMB0, CGI-45, ENST00000340990.1, ENST00000340990.2, ENST00000340990.3, ENST00000340990.4, ENST00000340990.5, ENST00000340990.6, ENST00000340990.7, ENST00000340990.8, ENST00000340990.9, NM_015999, PAQR1 , PAQR1_HUMAN, Q53HS7, Q53YY6, Q96A54, Q9Y360, TESBP1A, uc317vwk.1, uc317vwk.2
UCSC ID: ENST00000340990.10_7
RefSeq Accession: NM_015999.6
Protein: Q96A54 (aka ADR1_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.