Human Gene ANXA2 (ENST00000451270.7_7) from GENCODE V47lift37
  Description: annexin A2, transcript variant 3 (from RefSeq NM_004039.3)
Gencode Transcript: ENST00000451270.7_7
Gencode Gene: ENSG00000182718.18_14
Transcript (Including UTRs)
   Position: hg19 chr15:60,639,350-60,690,185 Size: 50,836 Total Exon Count: 13 Strand: -
Coding Region
   Position: hg19 chr15:60,639,829-60,678,274 Size: 38,446 Coding Exon Count: 12 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr15:60,639,350-60,690,185)mRNA (may differ from genome)Protein (339 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: ANXA2_HUMAN
DESCRIPTION: RecName: Full=Annexin A2; AltName: Full=Annexin II; AltName: Full=Annexin-2; AltName: Full=Calpactin I heavy chain; AltName: Full=Calpactin-1 heavy chain; AltName: Full=Chromobindin-8; AltName: Full=Lipocortin II; AltName: Full=Placental anticoagulant protein IV; Short=PAP-IV; AltName: Full=Protein I; AltName: Full=p36;
FUNCTION: Calcium-regulated membrane-binding protein whose affinity for calcium is greatly enhanced by anionic phospholipids. It binds two calcium ions with high affinity. May be involved in heat-stress response.
SUBUNIT: Heterotetramer containing 2 light chains of S100A10/p11 and 2 heavy chains of ANXA2/p36. Interacts with ATP1B1 and DYSF (By similarity). Interacts with human cytomegalovirus (HCMV). Interacts with COCH.
INTERACTION: P40692:MLH1; NbExp=7; IntAct=EBI-352622, EBI-744248;
SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular matrix, basement membrane. Melanosome. Note=In the lamina beneath the plasma membrane. Identified by mass spectrometry in melanosome fractions from stage I to stage IV. Translocated from the cytoplasm to the cell surface through a Golgi-independent mechanism.
DOMAIN: A pair of annexin repeats may form one binding site for calcium and phospholipid.
PTM: Phosphorylation of Tyr-24 enhances heat stress-induced translocation to the cell surface.
PTM: ISGylated.
MISCELLANEOUS: It may cross-link plasma membrane phospholipids with actin and the cytoskeleton and be involved with exocytosis.
SIMILARITY: Belongs to the annexin family.
SIMILARITY: Contains 4 annexin repeats.
SEQUENCE CAUTION: Sequence=AAH66955.2; Type=Erroneous initiation;
WEB RESOURCE: Name=Protein Spotlight; Note=Red velvet - Issue 86 of September 2007; URL="http://web.expasy.org/spotlight/back_issues/sptlt086.shtml";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: ANXA2
Diseases sorted by gene-association score: retinitis pigmentosa 36 (3), keloid formation (3), pancreatic cancer (3), leukemia, acute promyelocytic, somatic (3), deep angioma (2), hemophagocytic lymphohistiocytosis, familial, 3 (1), intramuscular hemangioma (1), papillary hidradenoma (1), endocervicitis (1), dysgerminoma of ovary (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 464.40 RPKM in Cells - Cultured fibroblasts
Total median expression: 4246.18 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -11.6055-0.211 Picture PostScript Text
3' UTR -120.50479-0.252 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR001464 - Annexin
IPR018502 - Annexin_repeat
IPR018252 - Annexin_repeat_CS
IPR002389 - AnnexinII

Pfam Domains:
PF00191 - Annexin

SCOP Domains:
47874 - Annexin

Protein Data Bank (PDB) 3-D Structure
MuPIT help
1W7B - X-ray MuPIT 1XJL - X-ray MuPIT 2HYU - X-ray MuPIT 2HYV - X-ray MuPIT 2HYW - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on P07355
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGD    
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0002020 protease binding
GO:0003723 RNA binding
GO:0004859 phospholipase inhibitor activity
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0005544 calcium-dependent phospholipid binding
GO:0005546 phosphatidylinositol-4,5-bisphosphate binding
GO:0008092 cytoskeletal protein binding
GO:0017137 Rab GTPase binding
GO:0019834 phospholipase A2 inhibitor activity
GO:0042802 identical protein binding
GO:0044548 S100 protein binding
GO:0044730 bone sialoprotein binding
GO:0048306 calcium-dependent protein binding
GO:0098641 cadherin binding involved in cell-cell adhesion
GO:0098772 molecular function regulator

Biological Process:
GO:0001525 angiogenesis
GO:0001765 membrane raft assembly
GO:0001921 positive regulation of receptor recycling
GO:0001934 positive regulation of protein phosphorylation
GO:0006900 membrane budding
GO:0007589 body fluid secretion
GO:0030199 collagen fibril organization
GO:0031340 positive regulation of vesicle fusion
GO:0032804 negative regulation of low-density lipoprotein particle receptor catabolic process
GO:0035722 interleukin-12-mediated signaling pathway
GO:0036035 osteoclast development
GO:0042730 fibrinolysis
GO:0043086 negative regulation of catalytic activity
GO:0043312 neutrophil degranulation
GO:0044090 positive regulation of vacuole organization
GO:0044147 negative regulation of development of symbiont involved in interaction with host
GO:0048146 positive regulation of fibroblast proliferation
GO:0051099 positive regulation of binding
GO:0051290 protein heterotetramerization
GO:0052362 catabolism by host of symbiont protein
GO:0052405 negative regulation by host of symbiont molecular function
GO:0072659 protein localization to plasma membrane
GO:0097066 response to thyroid hormone
GO:0098609 cell-cell adhesion
GO:1905581 positive regulation of low-density lipoprotein particle clearance
GO:1905597 positive regulation of low-density lipoprotein particle receptor binding
GO:1905599 positive regulation of low-density lipoprotein receptor activity
GO:1905602 positive regulation of receptor-mediated endocytosis involved in cholesterol transport

Cellular Component:
GO:0001726 ruffle
GO:0005576 extracellular region
GO:0005604 basement membrane
GO:0005615 extracellular space
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005765 lysosomal membrane
GO:0005768 endosome
GO:0005769 early endosome
GO:0005811 lipid particle
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0005913 cell-cell adherens junction
GO:0005938 cell cortex
GO:0009986 cell surface
GO:0016020 membrane
GO:0016323 basolateral plasma membrane
GO:0019897 extrinsic component of plasma membrane
GO:0030496 midbody
GO:0031012 extracellular matrix
GO:0031902 late endosome membrane
GO:0031982 vesicle
GO:0032991 macromolecular complex
GO:0035578 azurophil granule lumen
GO:0035749 myelin sheath adaxonal region
GO:0042383 sarcolemma
GO:0042470 melanosome
GO:0043220 Schmidt-Lanterman incisure
GO:0044354 macropinosome
GO:0045121 membrane raft
GO:0048471 perinuclear region of cytoplasm
GO:0070062 extracellular exosome
GO:1990667 PCSK9-AnxA2 complex


-  Descriptions from all associated GenBank mRNAs
  HH837116 - Sequence 43 from Patent EP2231168.
HH837117 - Sequence 44 from Patent EP2231168.
HH837118 - Sequence 45 from Patent EP2231168.
HI214757 - Sequence 43 from Patent EP2076526.
HI214758 - Sequence 44 from Patent EP2076526.
HI214759 - Sequence 45 from Patent EP2076526.
HV601559 - JP 2011500003-A/43: Novel siRNA Structures.
HV601560 - JP 2011500003-A/44: Novel siRNA Structures.
HV601561 - JP 2011500003-A/45: Novel siRNA Structures.
HV856632 - JP 2010507387-A/43: Novel siRNAs and Methods of Use Thereof.
HV856633 - JP 2010507387-A/44: Novel siRNAs and Methods of Use Thereof.
HV856634 - JP 2010507387-A/45: Novel siRNAs and Methods of Use Thereof.
HW165119 - JP 2013102767-A/43: Novel siRNA's and Use Thereof.
HW165120 - JP 2013102767-A/44: Novel siRNA's and Use Thereof.
HW165121 - JP 2013102767-A/45: Novel siRNA's and Use Thereof.
HW675627 - JP 2014210789-A/43: Novel siRNA Structures.
HW675628 - JP 2014210789-A/44: Novel siRNA Structures.
HW675629 - JP 2014210789-A/45: Novel siRNA Structures.
HW835315 - JP 2015051004-A/43: Novel siRNA's and Use Thereof.
HW835316 - JP 2015051004-A/44: Novel siRNA's and Use Thereof.
HW835317 - JP 2015051004-A/45: Novel siRNA's and Use Thereof.
JA482123 - Sequence 106 from Patent WO2011072091.
JA482124 - Sequence 107 from Patent WO2011072091.
JA482125 - Sequence 108 from Patent WO2011072091.
JA482126 - Sequence 109 from Patent WO2011072091.
JA538158 - Sequence 43 from Patent EP2371958.
JA538159 - Sequence 44 from Patent EP2371958.
JA538160 - Sequence 45 from Patent EP2371958.
JE980415 - Sequence 106 from Patent EP2862929.
JE980416 - Sequence 107 from Patent EP2862929.
JE980417 - Sequence 108 from Patent EP2862929.
JE980418 - Sequence 109 from Patent EP2862929.
LQ740455 - Sequence 9 from Patent WO2018083189.
BC068065 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:78564 IMAGE:6265952), complete cds.
BC009564 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:10129 IMAGE:3901641), complete cds.
BC021114 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:31902 IMAGE:5092810), complete cds.
BC052567 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:59829 IMAGE:6483607), complete cds.
BC001388 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:2257 IMAGE:3051155), complete cds.
BC013843 - Homo sapiens annexin A2, mRNA (cDNA clone IMAGE:3918525).
BX640598 - Homo sapiens mRNA; cDNA DKFZp686P03159 (from clone DKFZp686P03159).
BC066955 - Homo sapiens annexin A2, mRNA (cDNA clone IMAGE:4826161).
LF213759 - JP 2014500723-A/21262: Polycomb-Associated Non-Coding RNAs.
D00017 - Homo sapiens mRNA for lipocortin II, complete cds.
AK297923 - Homo sapiens cDNA FLJ59138 complete cds, highly similar to Annexin A2.
BC016774 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:23717 IMAGE:4096060), complete cds.
BC015834 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:27157 IMAGE:4094952), complete cds.
BC093056 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:111139 IMAGE:30403089), complete cds.
BC023990 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:24294 IMAGE:3961419), complete cds.
FJ224302 - Homo sapiens epididymis secretory protein Li 270 (HEL-S-270) mRNA, complete cds.
AK222542 - Homo sapiens mRNA, annexin A2 isoform 1 variant, clone: adSU00201.
AB587463 - Synthetic construct DNA, clone: pF1KB8277, Homo sapiens ANXA2 gene for annexin A2, without stop codon, in Flexi system.
AK309956 - Homo sapiens cDNA, FLJ99997.
D28364 - Homo sapiens mRNA for annexin II, 5'UTR region.
MA449336 - JP 2018138019-A/21262: Polycomb-Associated Non-Coding RNAs.
AK309356 - Homo sapiens cDNA, FLJ99397.
BC052558 - Homo sapiens annexin A2, mRNA (cDNA clone MGC:59828 IMAGE:6247665), complete cds.
AK124427 - Homo sapiens cDNA FLJ42436 fis, clone BLADE2007033, highly similar to ANNEXIN II.
AK092006 - Homo sapiens cDNA FLJ34687 fis, clone MESAN2000620, highly similar to Annexin A2.
AX747305 - Sequence 830 from Patent EP1308459.
JD044550 - Sequence 25574 from Patent EP1572962.
DJ439523 - Annexin II and uses thereof.
DJ439522 - Annexin II and uses thereof.
JD161773 - Sequence 142797 from Patent EP1572962.
JD309880 - Sequence 290904 from Patent EP1572962.
JD051596 - Sequence 32620 from Patent EP1572962.
JD143130 - Sequence 124154 from Patent EP1572962.
JD335988 - Sequence 317012 from Patent EP1572962.
KJ896429 - Synthetic construct Homo sapiens clone ccsbBroadEn_05823 ANXA2 gene, encodes complete protein.
KJ896430 - Synthetic construct Homo sapiens clone ccsbBroadEn_05824 ANXA2 gene, encodes complete protein.
KJ896431 - Synthetic construct Homo sapiens clone ccsbBroadEn_05825 ANXA2 gene, encodes complete protein.
GQ891295 - Homo sapiens clone HEL-S-18a epididymis secretory sperm binding protein mRNA, complete cds.
BT007432 - Homo sapiens annexin A2 mRNA, complete cds.
DQ891008 - Synthetic construct clone IMAGE:100003638; FLH168479.01X; RZPDo839H0492D annexin A2 (ANXA2) gene, encodes complete protein.
DQ894187 - Synthetic construct Homo sapiens clone IMAGE:100008647; FLH168475.01L; RZPDo839H0491D annexin A2 (ANXA2) gene, encodes complete protein.
DJ439520 - Annexin II and uses thereof.
JD434189 - Sequence 415213 from Patent EP1572962.
DJ439487 - Annexin II and uses thereof.
DJ439516 - Annexin II and uses thereof.
DJ439486 - Annexin II and uses thereof.
DJ439481 - Annexin II and uses thereof.
DJ439505 - Annexin II and uses thereof.
DJ439519 - Annexin II and uses thereof.
DJ439503 - Annexin II and uses thereof.
DJ439464 - Annexin II and uses thereof.
CU692830 - Synthetic construct Homo sapiens gateway clone IMAGE:100021932 5' read ANXA2 mRNA.
DJ439492 - Annexin II and uses thereof.
DJ439502 - Annexin II and uses thereof.
DJ439467 - Annexin II and uses thereof.
DJ439465 - Annexin II and uses thereof.
DJ439472 - Annexin II and uses thereof.
DJ439475 - Annexin II and uses thereof.
DJ439495 - Annexin II and uses thereof.
DJ439490 - Annexin II and uses thereof.
DJ439488 - Annexin II and uses thereof.
DJ439473 - Annexin II and uses thereof.
DJ439500 - Annexin II and uses thereof.
CU690914 - Synthetic construct Homo sapiens gateway clone IMAGE:100022447 5' read ANXA2 mRNA.
JD095867 - Sequence 76891 from Patent EP1572962.
CU679401 - Synthetic construct Homo sapiens gateway clone IMAGE:100019002 5' read ANXA2 mRNA.
DJ439456 - Annexin II and uses thereof.
DJ439458 - Annexin II and uses thereof.
DJ439455 - Annexin II and uses thereof.
DJ439517 - Annexin II and uses thereof.
DJ439499 - Annexin II and uses thereof.
DJ439477 - Annexin II and uses thereof.
DJ439521 - Annexin II and uses thereof.
DJ439524 - Annexin II and uses thereof.
JD052275 - Sequence 33299 from Patent EP1572962.
DJ439498 - Annexin II and uses thereof.
DJ439483 - Annexin II and uses thereof.
DJ439515 - Annexin II and uses thereof.
DJ439493 - Annexin II and uses thereof.
DJ439497 - Annexin II and uses thereof.
DJ439501 - Annexin II and uses thereof.
DJ439470 - Annexin II and uses thereof.
DJ439474 - Annexin II and uses thereof.
DJ439513 - Annexin II and uses thereof.
DJ439484 - Annexin II and uses thereof.
DJ439504 - Annexin II and uses thereof.
DJ439512 - Annexin II and uses thereof.
DJ439479 - Annexin II and uses thereof.
DJ439478 - Annexin II and uses thereof.
DJ439476 - Annexin II and uses thereof.
DJ439482 - Annexin II and uses thereof.
DJ439514 - Annexin II and uses thereof.
DJ439453 - Annexin II and uses thereof.
DJ439452 - Annexin II and uses thereof.
DJ439459 - Annexin II and uses thereof.
DJ439457 - Annexin II and uses thereof.
JD372188 - Sequence 353212 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P07355 (Reactome details) participates in the following event(s):

R-HSA-5263628 CAV3:TRIM72:DYSF binds ANXAs
R-HSA-6798751 Exocytosis of azurophil granule lumen proteins
R-HSA-445355 Smooth Muscle Contraction
R-HSA-8950505 Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation
R-HSA-397014 Muscle contraction
R-HSA-6798695 Neutrophil degranulation
R-HSA-9020591 Interleukin-12 signaling
R-HSA-168249 Innate Immune System
R-HSA-447115 Interleukin-12 family signaling
R-HSA-168256 Immune System
R-HSA-449147 Signaling by Interleukins
R-HSA-1280215 Cytokine Signaling in Immune system

-  Other Names for This Gene
  Alternate Gene Symbols: ANX2, ANX2L4, ANXA2_HUMAN, CAL1H, ENST00000451270.1, ENST00000451270.2, ENST00000451270.3, ENST00000451270.4, ENST00000451270.5, ENST00000451270.6, LPC2D, NM_004039, P07355, Q567R4, Q6N0B3, Q8TBV2, Q96DD5, Q9UDH8, uc320sqr.1, uc320sqr.2
UCSC ID: ENST00000451270.7_7
RefSeq Accession: NM_004039.3
Protein: P07355 (aka ANXA2_HUMAN or ANX2_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.