Human Gene CD14 (ENST00000302014.11_7) from GENCODE V47lift37
  Description: CD14 molecule, transcript variant 1 (from RefSeq NM_000591.4)
Gencode Transcript: ENST00000302014.11_7
Gencode Gene: ENSG00000170458.15_11
Transcript (Including UTRs)
   Position: hg19 chr5:140,011,317-140,012,760 Size: 1,444 Total Exon Count: 2 Strand: -
Coding Region
   Position: hg19 chr5:140,011,441-140,012,656 Size: 1,216 Coding Exon Count: 2 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr5:140,011,317-140,012,760)mRNA (may differ from genome)Protein (375 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: CD14_HUMAN
DESCRIPTION: RecName: Full=Monocyte differentiation antigen CD14; AltName: Full=Myeloid cell-specific leucine-rich glycoprotein; AltName: CD_antigen=CD14; Contains: RecName: Full=Monocyte differentiation antigen CD14, urinary form; Contains: RecName: Full=Monocyte differentiation antigen CD14, membrane-bound form; Flags: Precursor;
FUNCTION: Cooperates with MD-2 and TLR4 to mediate the innate immune response to bacterial lipopolysaccharide (LPS). Acts via MyD88, TIRAP and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. Up-regulates cell surface molecules, including adhesion molecules.
SUBUNIT: Belongs to the lipopolysaccharide (LPS) receptor, a multi-protein complex containing at least CD14, MD-2 and TLR4.
SUBCELLULAR LOCATION: Cell membrane; Lipid-anchor, GPI-anchor.
TISSUE SPECIFICITY: Expressed strongly on the surface of monocytes and weakly on the surface of granulocytes; also expressed by most tissue macrophages.
PTM: N- and O- glycosylated. O-glycosylated with a core 1 or possibly core 8 glycan.
SIMILARITY: Contains 11 LRR (leucine-rich) repeats.
WEB RESOURCE: Name=Wikipedia; Note=CD14 entry; URL="http://en.wikipedia.org/wiki/CD14";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: CD14
Diseases sorted by gene-association score: mycobacterium chelonae (18), croup (18), monocytic leukemia (13), mycobacterium kansasii (13), paroxysmal nocturnal hemoglobinuria (12), viral meningitis (7), hemoglobinuria (6), atopy (6), peanut allergy (6), irak4 deficiency (5), myd88 deficiency (5), myocardial infarction (3)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 160.85 RPKM in Whole Blood
Total median expression: 1156.31 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -29.10104-0.280 Picture PostScript Text
3' UTR -23.50124-0.190 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR001611 - Leu-rich_rpt
IPR016337 - Monocyte_diff_Ag_CD14

Pfam Domains:
PF13516 - Leucine Rich repeat

SCOP Domains:
52047 - RNI-like
52058 - L domain-like
52075 - Outer arm dynein light chain 1

ModBase Predicted Comparative 3D Structure on P08571
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGD    
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0001530 lipopolysaccharide binding
GO:0001847 opsonin receptor activity
GO:0005515 protein binding
GO:0016019 peptidoglycan receptor activity
GO:0070891 lipoteichoic acid binding
GO:0071723 lipopeptide binding

Biological Process:
GO:0002224 toll-like receptor signaling pathway
GO:0002237 response to molecule of bacterial origin
GO:0002376 immune system process
GO:0002755 MyD88-dependent toll-like receptor signaling pathway
GO:0002756 MyD88-independent toll-like receptor signaling pathway
GO:0006898 receptor-mediated endocytosis
GO:0006909 phagocytosis
GO:0006915 apoptotic process
GO:0006954 inflammatory response
GO:0007166 cell surface receptor signaling pathway
GO:0007249 I-kappaB kinase/NF-kappaB signaling
GO:0009408 response to heat
GO:0009617 response to bacterium
GO:0031663 lipopolysaccharide-mediated signaling pathway
GO:0032026 response to magnesium ion
GO:0032481 positive regulation of type I interferon production
GO:0032496 response to lipopolysaccharide
GO:0032729 positive regulation of interferon-gamma production
GO:0032760 positive regulation of tumor necrosis factor production
GO:0034128 negative regulation of MyD88-independent toll-like receptor signaling pathway
GO:0034142 toll-like receptor 4 signaling pathway
GO:0034612 response to tumor necrosis factor
GO:0035666 TRIF-dependent toll-like receptor signaling pathway
GO:0038123 toll-like receptor TLR1:TLR2 signaling pathway
GO:0038124 toll-like receptor TLR6:TLR2 signaling pathway
GO:0043312 neutrophil degranulation
GO:0045087 innate immune response
GO:0045471 response to ethanol
GO:0045807 positive regulation of endocytosis
GO:0050715 positive regulation of cytokine secretion
GO:0051602 response to electrical stimulus
GO:0070266 necroptotic process
GO:0071219 cellular response to molecule of bacterial origin
GO:0071222 cellular response to lipopolysaccharide
GO:0071223 cellular response to lipoteichoic acid
GO:0071726 cellular response to diacyl bacterial lipopeptide
GO:0071727 cellular response to triacyl bacterial lipopeptide
GO:0097190 apoptotic signaling pathway
GO:1901224 positive regulation of NIK/NF-kappaB signaling
GO:2000484 positive regulation of interleukin-8 secretion

Cellular Component:
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005794 Golgi apparatus
GO:0005886 plasma membrane
GO:0009897 external side of plasma membrane
GO:0009986 cell surface
GO:0010008 endosome membrane
GO:0016020 membrane
GO:0030667 secretory granule membrane
GO:0031225 anchored component of membrane
GO:0031362 anchored component of external side of plasma membrane
GO:0045121 membrane raft
GO:0046696 lipopolysaccharide receptor complex
GO:0070062 extracellular exosome


-  Descriptions from all associated GenBank mRNAs
  LF211017 - JP 2014500723-A/18520: Polycomb-Associated Non-Coding RNAs.
LF212731 - JP 2014500723-A/20234: Polycomb-Associated Non-Coding RNAs.
LF213421 - JP 2014500723-A/20924: Polycomb-Associated Non-Coding RNAs.
AX429254 - Sequence 9 from Patent WO0235236.
M86511 - Human monocyte antigen CD14 (CD14) mRNA, complete cds.
BC010507 - Homo sapiens CD14 molecule, mRNA (cDNA clone MGC:17221 IMAGE:4149008), complete cds.
X13334 - Human CD14 mRNA for myelid cell-specific leucine-rich glycoprotein.
HV447129 - WO 1998039438-A/1: Antisense compound against CD14.
JD171944 - Sequence 152968 from Patent EP1572962.
JD087741 - Sequence 68765 from Patent EP1572962.
AF097942 - Homo sapiens monocyte antigen CD14 precursor (CD14) mRNA, complete cds.
AB446505 - Homo sapiens CD14 mRNA for monocyte differentiation antigen CD14, complete cds.
AK313277 - Homo sapiens cDNA, FLJ93789, highly similar to Homo sapiens CD14 antigen (CD14), mRNA.
BT007331 - Homo sapiens CD14 antigen mRNA, complete cds.
KJ890855 - Synthetic construct Homo sapiens clone ccsbBroadEn_00249 CD14 gene, encodes complete protein.
AM392692 - Synthetic construct Homo sapiens clone IMAGE:100002988 for hypothetical protein (CD14 gene).
AM392824 - Synthetic construct Homo sapiens clone IMAGE:100002989 for hypothetical protein (CD14 gene).
AM393386 - Synthetic construct Homo sapiens clone IMAGE:100002738 for hypothetical protein (CD14 gene).
AM393697 - Synthetic construct Homo sapiens clone IMAGE:100002739 for hypothetical protein (CD14 gene).
AB528100 - Synthetic construct DNA, clone: pF1KE0478, Homo sapiens CD14 gene for CD14 molecule, without stop codon, in Flexi system.
CQ873860 - Sequence 279 from Patent WO2004076622.
DD413697 - Regulation of Mammalian Cells.
AY044269 - Homo sapiens CD14 antigen mRNA, partial cds.
LF343259 - JP 2014500723-A/150762: Polycomb-Associated Non-Coding RNAs.
MA578836 - JP 2018138019-A/150762: Polycomb-Associated Non-Coding RNAs.
MA446594 - JP 2018138019-A/18520: Polycomb-Associated Non-Coding RNAs.
MA448308 - JP 2018138019-A/20234: Polycomb-Associated Non-Coding RNAs.
MA448998 - JP 2018138019-A/20924: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P08571 (Reactome details) participates in the following event(s):

R-HSA-169719 Secreted CD14 binds LPS
R-HSA-8869694 oxPL binds CD14
R-HSA-166038 GPI-bound CD14 binds LPS
R-HSA-2559464 TLR6/2 ligand associates with CD14 and CD36 within lipid rafts
R-HSA-2559468 TLR1/2 ligand binds to CD14
R-HSA-168950 TLR6:TLR2 is recruited to ligand:CD14:CD36
R-HSA-168951 TLR1:TLR2 is recruited to ligand:CD14
R-HSA-6798743 Exocytosis of secretory granule membrane proteins
R-HSA-166168 TLR4:LY96:LPS:CD14 recruits TRAM (TICAM2)
R-HSA-2201293 Endocytosis of TLR4:LY96:LPS:CD14
R-HSA-166041 Transfer of LPS onto TLR4
R-HSA-2559439 CD14:LPS binds CR3
R-HSA-166175 TRAM:TLR4:LY96:LPS:CD14 recruits TRIF (TICAM1)
R-HSA-2201316 Activated TLR2/4 interacts with MAL(TIRAP)
R-HSA-168921 TRIF:activated TLR3/TLR4 complex recruits RIP1
R-HSA-936985 Activated TLR4:TICAM1 recruits TRAF6
R-HSA-2201338 TRAF3 binds TICAM1:activated TLR4 complex
R-HSA-2559568 SARM binds TICAM1:TRAM:TLR4:LY96:LPS:CD14
R-HSA-937075 Phosphorylated TAK1 leaves activated TLR receptor complex
R-HSA-166072 MyD88 forms a complex with MAL:activated TLR2/4
R-HSA-2201322 MAL is phosphorylated by BTK
R-HSA-2559414 Activated TLR2/4:MAL interacts with BTK
R-HSA-168915 K63-linked ubiquitination of RIP1 bound to the activated TLR complex
R-HSA-2562541 TLR4-induced ripoptosome assembly
R-HSA-936947 Activated TLR4:TICAM1:K63pUb-TRAF6 recruits TAK1complex
R-HSA-937029 IKBKG subunit of IKK complex binds polyubiquinated RIP1
R-HSA-5362486 TANK binds K63-poly-Ub-TRAF3:TICAM1:activated TLR4
R-HSA-2562564 Caspase-8 processing within TLR4 complex
R-HSA-2569057 RIP3 binds TRIF to mediate necroptosis
R-HSA-937079 MyD88 oligomerization within the complex of activated TLR:Mal:MyD88
R-HSA-166082 IRAK4 binds to the activated TLR receptor:Mal:MyD88 complex
R-HSA-936951 Activation of TAK1 complex bound to activated TLR4 complex
R-HSA-936941 Recruitment of TBK1/IKK epsilon to K63-pUb-TANK:K63-pUb-TRAF3:TRIF:activated TLR4 followed by their phosphorylation
R-HSA-937022 IRAK4 autophosphorylation in the complex with activated TLR:MyD88:Mal
R-HSA-166091 IRAK1 or IRAK2 binds to the activated IRAK4 :activated TLR:MyD88:Mal complex
R-HSA-166362 Dissociation of hp-IRAK1:TRAF6 from the activated TLR:oligo-Myd88:Mal:p-IRAK4 complex
R-HSA-2262775 Dissociation of p-IRAK2:TRAF6 from the activated TLR:oligo-Myd88:Mal:p-IRAK4 complex
R-HSA-166271 IRF3/IRF7 recruitment to p-TBK1/p-IKK epsilon bound to the activated TLR4
R-HSA-166245 Phosphorylation of IRF-3/IRF7 and their release from the activated TLR complex
R-HSA-166286 Multiple IRAK1 autophosphorylation steps
R-HSA-166284 Second phosphorylation of IRAK1 by IRAK4 bound to activated TLR:MyD88:Mal
R-HSA-166119 First phosphorylation of IRAK1 by IRAK4 bound to activated TLR:MyD88:Mal
R-HSA-166363 TRAF6 binds to hp- IRAK1
R-HSA-937059 Phosphorylation of IRAK2 bound to the activated IRAK4:MyD88 oligomer:Mal:activated TLR complex
R-HSA-2262777 TRAF6 binds to p-IRAK2
R-HSA-166020 Transfer of LPS from LBP carrier to CD14
R-HSA-5686938 Regulation of TLR by endogenous ligand
R-HSA-168188 Toll Like Receptor TLR6:TLR2 Cascade
R-HSA-168179 Toll Like Receptor TLR1:TLR2 Cascade
R-HSA-166016 Toll Like Receptor 4 (TLR4) Cascade
R-HSA-168898 Toll-Like Receptors Cascades
R-HSA-6798695 Neutrophil degranulation
R-HSA-181438 Toll Like Receptor 2 (TLR2) Cascade
R-HSA-168249 Innate Immune System
R-HSA-166166 MyD88-independent TLR4 cascade
R-HSA-166058 MyD88:Mal cascade initiated on plasma membrane
R-HSA-168256 Immune System
R-HSA-937041 IKK complex recruitment mediated by RIP1
R-HSA-937072 TRAF6-mediated induction of TAK1 complex within TLR4 complex
R-HSA-936964 Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon
R-HSA-5602498 MyD88 deficiency (TLR2/4)
R-HSA-2562578 TRIF-mediated programmed cell death
R-HSA-140534 Ligand-dependent caspase activation
R-HSA-937061 TRIF(TICAM1)-mediated TLR4 signaling
R-HSA-5603041 IRAK4 deficiency (TLR2/4)
R-HSA-5602358 Diseases associated with the TLR signaling cascade
R-HSA-5357769 Caspase activation via extrinsic apoptotic signalling pathway
R-HSA-5260271 Diseases of Immune System
R-HSA-975163 IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation
R-HSA-9014325 TICAM1,TRAF6-dependent induction of TAK1 complex
R-HSA-109581 Apoptosis
R-HSA-1643685 Disease
R-HSA-975138 TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
R-HSA-168164 Toll Like Receptor 3 (TLR3) Cascade
R-HSA-5357801 Programmed Cell Death
R-HSA-975155 MyD88 dependent cascade initiated on endosome
R-HSA-168138 Toll Like Receptor 9 (TLR9) Cascade
R-HSA-168181 Toll Like Receptor 7/8 (TLR7/8) Cascade

-  Other Names for This Gene
  Alternate Gene Symbols: CD14_HUMAN, ENST00000302014.1, ENST00000302014.10, ENST00000302014.2, ENST00000302014.3, ENST00000302014.4, ENST00000302014.5, ENST00000302014.6, ENST00000302014.7, ENST00000302014.8, ENST00000302014.9, NM_000591, P08571, Q53XT5, Q96FR6, Q96L99, Q9UNS3, uc317myb.1, uc317myb.2
UCSC ID: ENST00000302014.11_7
RefSeq Accession: NM_000591.4
Protein: P08571 (aka CD14_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.