Human Gene DOK1 (ENST00000233668.10_4) from GENCODE V47lift37
  Description: docking protein 1, transcript variant 1 (from RefSeq NM_001381.5)
Gencode Transcript: ENST00000233668.10_4
Gencode Gene: ENSG00000115325.14_7
Transcript (Including UTRs)
   Position: hg19 chr2:74,781,847-74,784,678 Size: 2,832 Total Exon Count: 5 Strand: +
Coding Region
   Position: hg19 chr2:74,781,882-74,784,241 Size: 2,360 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:74,781,847-74,784,678)mRNA (may differ from genome)Protein (481 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
HGNCMalacardsMGIOMIMPubMedReactome
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: DOK1_HUMAN
DESCRIPTION: RecName: Full=Docking protein 1; AltName: Full=Downstream of tyrosine kinase 1; AltName: Full=p62(dok); AltName: Full=pp62;
FUNCTION: DOK proteins are enzymatically inert adaptor or scaffolding proteins. They provide a docking platform for the assembly of multimolecular signaling complexes. DOK1 appears to be a negative regulator of the insulin signaling pathway. Modulates integrin activation by competing with talin for the same binding site on ITGB3.
SUBUNIT: Interacts with ABL1 (By similarity). Interacts with RasGAP and INPP5D/SHIP1. Interacts directly with phosphorylated ITGB3.
INTERACTION: Q9Q2G4:ORF (xeno); NbExp=2; IntAct=EBI-1384360, EBI-6248094;
SUBCELLULAR LOCATION: Isoform 1: Cytoplasm.
SUBCELLULAR LOCATION: Isoform 3: Cytoplasm, perinuclear region.
TISSUE SPECIFICITY: Expressed in pancreas, heart, leukocyte and spleen. Expressed in both resting and activated peripheral blood T-cells.
DOMAIN: The PTB domain mediates receptor interaction.
PTM: Constitutively tyrosine-phosphorylated. Phosphorylated by TEC (By similarity). Phosphorylated by LYN (By similarity).
PTM: Phosphorylated on tyrosine residues by the insulin receptor kinase. Results in the negative regulation of the insulin signaling pathway.
PTM: Isoform 3 contains a N-acetylmethionine at position 1.
SIMILARITY: Belongs to the DOK family. Type A subfamily.
SIMILARITY: Contains 1 IRS-type PTB domain.
SIMILARITY: Contains 1 PH domain.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: DOK1
Diseases sorted by gene-association score: leukemia, chronic myeloid, somatic (3)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 18.12 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 227.61 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -12.6035-0.360 Picture PostScript Text
3' UTR -154.20437-0.353 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR002404 - Insln_rcpt_S1
IPR011993 - PH_like_dom
IPR001849 - Pleckstrin_homology

Pfam Domains:
PF00169 - PH domain
PF02174 - PTB domain (IRS-1 type)

SCOP Domains:
50729 - PH domain-like

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2V76 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q99704
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGDEnsembl   
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0005057 signal transducer activity, downstream of receptor
GO:0005515 protein binding

Biological Process:
GO:0007165 signal transduction
GO:0007166 cell surface receptor signaling pathway
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007265 Ras protein signal transduction
GO:0007411 axon guidance
GO:0035556 intracellular signal transduction
GO:0045742 positive regulation of epidermal growth factor receptor signaling pathway

Cellular Component:
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0048471 perinuclear region of cytoplasm


-  Descriptions from all associated GenBank mRNAs
  AF035299 - Homo sapiens clone 23863 mRNA, partial cds.
AK055944 - Homo sapiens cDNA FLJ31382 fis, clone NHNPC2000187, highly similar to Docking protein 1 (Downstream of tyrosine kinase 1).
LF212045 - JP 2014500723-A/19548: Polycomb-Associated Non-Coding RNAs.
LF207211 - JP 2014500723-A/14714: Polycomb-Associated Non-Coding RNAs.
LF213902 - JP 2014500723-A/21405: Polycomb-Associated Non-Coding RNAs.
AK222883 - Homo sapiens mRNA for docking protein 1 variant, clone: HRC01377.
BC111055 - Homo sapiens docking protein 1, 62kDa (downstream of tyrosine kinase 1), mRNA (cDNA clone MGC:117395 IMAGE:5752188), complete cds.
U70987 - Human GAP binding protein p62dok (DOK) mRNA, complete cds.
BC114440 - Homo sapiens docking protein 1, 62kDa (downstream of tyrosine kinase 1), mRNA (cDNA clone MGC:138861 IMAGE:40083624), complete cds.
AK127127 - Homo sapiens cDNA FLJ45184 fis, highly similar to Docking protein 1 (Downstream of tyrosine kinase 1).
AK127656 - Homo sapiens cDNA FLJ45754 fis, clone LYMPB2002806, highly similar to Docking protein 1 (Downstream of tyrosine kinase 1).
AK314678 - Homo sapiens cDNA, FLJ95529.
BC114497 - Homo sapiens docking protein 1, 62kDa (downstream of tyrosine kinase 1), mRNA (cDNA clone MGC:138860 IMAGE:40083623), complete cds.
AK296154 - Homo sapiens cDNA FLJ55693 complete cds, highly similar to Docking protein 1 (Downstream of tyrosinekinase 1).
AB587402 - Synthetic construct DNA, clone: pF1KB5834, Homo sapiens DOK1 gene for docking protein 1, 62kDa, without stop codon, in Flexi system.
KJ891061 - Synthetic construct Homo sapiens clone ccsbBroadEn_00455 DOK1 gene, encodes complete protein.
AF180527 - Homo sapiens p22Dokdel (DOKDEL) mRNA, complete cds.
AK300097 - Homo sapiens cDNA FLJ60879 complete cds, highly similar to Docking protein 1 (Downstream of tyrosinekinase 1).
LF213047 - JP 2014500723-A/20550: Polycomb-Associated Non-Coding RNAs.
LF363176 - JP 2014500723-A/170679: Polycomb-Associated Non-Coding RNAs.
DL492103 - Novel nucleic acids.
DL490640 - Novel nucleic acids.
JD403739 - Sequence 384763 from Patent EP1572962.
JD141956 - Sequence 122980 from Patent EP1572962.
LF363175 - JP 2014500723-A/170678: Polycomb-Associated Non-Coding RNAs.
JD219414 - Sequence 200438 from Patent EP1572962.
JD278897 - Sequence 259921 from Patent EP1572962.
LF363174 - JP 2014500723-A/170677: Polycomb-Associated Non-Coding RNAs.
JD506896 - Sequence 487920 from Patent EP1572962.
JD445922 - Sequence 426946 from Patent EP1572962.
JD118042 - Sequence 99066 from Patent EP1572962.
JD453370 - Sequence 434394 from Patent EP1572962.
JD215048 - Sequence 196072 from Patent EP1572962.
JD102973 - Sequence 83997 from Patent EP1572962.
JD215763 - Sequence 196787 from Patent EP1572962.
JD256315 - Sequence 237339 from Patent EP1572962.
MA449479 - JP 2018138019-A/21405: Polycomb-Associated Non-Coding RNAs.
MA598753 - JP 2018138019-A/170679: Polycomb-Associated Non-Coding RNAs.
MA598752 - JP 2018138019-A/170678: Polycomb-Associated Non-Coding RNAs.
MA598751 - JP 2018138019-A/170677: Polycomb-Associated Non-Coding RNAs.
MA447622 - JP 2018138019-A/19548: Polycomb-Associated Non-Coding RNAs.
MA442788 - JP 2018138019-A/14714: Polycomb-Associated Non-Coding RNAs.
MA448624 - JP 2018138019-A/20550: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q99704 (Reactome details) participates in the following event(s):

R-HSA-8848774 PTK6 binds DOK1
R-HSA-8848776 PTK6 phosphorylates DOK1
R-HSA-8855617 2x p-5Y-RET:GDNF:GFRA complexes binds DOK1,DOK2,DOK4,DOK5,DOK6
R-HSA-8849469 PTK6 Regulates RTKs and Their Effectors AKT1 and DOK1
R-HSA-8853659 RET signaling
R-HSA-8848021 Signaling by PTK6
R-HSA-422475 Axon guidance
R-HSA-9006927 Signaling by Non-Receptor Tyrosine Kinases
R-HSA-1266738 Developmental Biology
R-HSA-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: DOK1_HUMAN, ENST00000233668.1, ENST00000233668.2, ENST00000233668.3, ENST00000233668.4, ENST00000233668.5, ENST00000233668.6, ENST00000233668.7, ENST00000233668.8, ENST00000233668.9, NM_001381, O43204, Q53TY2, Q99704, Q9UHG6, uc317dxp.1, uc317dxp.2
UCSC ID: ENST00000233668.10_4
RefSeq Accession: NM_001381.5
Protein: Q99704 (aka DOK1_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.